Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04436 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
P04436 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.04■□□□□ 0.32
P04436 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.04■□□□□ 0.32
P04436 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04436 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P04436 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.04■□□□□ 0.32
P04436 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.04■□□□□ 0.32
P04436 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04436 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
P04436 AC091076.1-201ENST00000610741 619 ntBASIC17.04■□□□□ 0.32
P04436 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.04■□□□□ 0.32
P04436 AL121956.5-201ENST00000625261 221 ntBASIC17.04■□□□□ 0.32
P04436 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04436 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
P04436 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.04■□□□□ 0.32
P04436 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P04436 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
P04436 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.04■□□□□ 0.32
P04436 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.04■□□□□ 0.32
P04436 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04436 HOXB1-202ENST00000577092 1414 ntBASIC17.04■□□□□ 0.32
P04436 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
P04436 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04436 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
P04436 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.04■□□□□ 0.32
P04436 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.04■□□□□ 0.32
P04436 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.03■□□□□ 0.32
P04436 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P04436 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.03■□□□□ 0.32
P04436 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04436 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04436 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04436 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04436 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P04436 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04436 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P04436 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04436 SPDYE15P-201ENST00000424157 909 ntBASIC17.03■□□□□ 0.32
P04436 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04436 SEC1P-202ENST00000473944 940 ntBASIC17.03■□□□□ 0.32
P04436 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.03■□□□□ 0.32
P04436 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.03■□□□□ 0.32
P04436 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
P04436 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
P04436 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04436 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04436 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04436 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
P04436 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04436 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.03■□□□□ 0.32
P04436 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04436 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P04436 LINC01311-201ENST00000565162 1445 ntBASIC17.03■□□□□ 0.32
P04436 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P04436 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.03■□□□□ 0.32
P04436 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
P04436 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04436 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
P04436 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04436 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04436 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
P04436 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.02■□□□□ 0.32
P04436 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04436 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04436 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04436 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04436 AL049812.1-201ENST00000432563 2267 ntBASIC17.02■□□□□ 0.32
P04436 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
P04436 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.02■□□□□ 0.32
P04436 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04436 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04436 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04436 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
P04436 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.02■□□□□ 0.32
P04436 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.02■□□□□ 0.32
P04436 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04436 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.02■□□□□ 0.32
P04436 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.02■□□□□ 0.32
P04436 AC083906.6-201ENST00000641366 219 ntBASIC17.02■□□□□ 0.32
P04436 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04436 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04436 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
P04436 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
P04436 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
P04436 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.02■□□□□ 0.31
P04436 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
P04436 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
P04436 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
P04436 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
P04436 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
P04436 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
P04436 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04436 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04436 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.01■□□□□ 0.31
P04436 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.01■□□□□ 0.31
P04436 AC006333.2-201ENST00000607957 2099 ntBASIC17.01■□□□□ 0.31
P04436 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
P04436 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04436 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms