Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD3DP04234 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD3DP04234 AC080080.1-201ENST00000625121 2420 ntBASIC15.83■□□□□ 0.12
CD3DP04234 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD3DP04234 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.83■□□□□ 0.12
CD3DP04234 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD3DP04234 AC034268.1-201ENST00000441047 882 ntBASIC15.83■□□□□ 0.12
CD3DP04234 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.83■□□□□ 0.12
CD3DP04234 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CD3DP04234 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.83■□□□□ 0.12
CD3DP04234 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.83■□□□□ 0.12
CD3DP04234 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC15.83■□□□□ 0.12
CD3DP04234 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD3DP04234 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CD3DP04234 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.83■□□□□ 0.12
CD3DP04234 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CD3DP04234 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CD3DP04234 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CD3DP04234 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CD3DP04234 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD3DP04234 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CD3DP04234 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CD3DP04234 REXO1L9P-201ENST00000604264 2108 ntBASIC15.83■□□□□ 0.12
CD3DP04234 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CD3DP04234 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.83■□□□□ 0.12
CD3DP04234 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CD3DP04234 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.83■□□□□ 0.12
CD3DP04234 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CD3DP04234 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.83■□□□□ 0.12
CD3DP04234 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.83■□□□□ 0.12
CD3DP04234 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.83■□□□□ 0.12
CD3DP04234 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CD3DP04234 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.83■□□□□ 0.12
CD3DP04234 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CD3DP04234 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD3DP04234 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD3DP04234 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD3DP04234 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD3DP04234 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CD3DP04234 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CD3DP04234 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD3DP04234 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD3DP04234 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD3DP04234 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CD3DP04234 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD3DP04234 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.82■□□□□ 0.12
CD3DP04234 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD3DP04234 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD3DP04234 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD3DP04234 TSPY23P-201ENST00000440136 739 ntBASIC15.82■□□□□ 0.12
CD3DP04234 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.82■□□□□ 0.12
CD3DP04234 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.82■□□□□ 0.12
CD3DP04234 RAP2CP1-201ENST00000605103 478 ntBASIC15.82■□□□□ 0.12
CD3DP04234 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.82■□□□□ 0.12
CD3DP04234 RCC2P6-201ENST00000526625 1557 ntBASIC15.82■□□□□ 0.12
CD3DP04234 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD3DP04234 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD3DP04234 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD3DP04234 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD3DP04234 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
CD3DP04234 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD3DP04234 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD3DP04234 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
CD3DP04234 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.82■□□□□ 0.12
CD3DP04234 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD3DP04234 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CD3DP04234 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CD3DP04234 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD3DP04234 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD3DP04234 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD3DP04234 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD3DP04234 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD3DP04234 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD3DP04234 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD3DP04234 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD3DP04234 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.81■□□□□ 0.12
CD3DP04234 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.81■□□□□ 0.12
CD3DP04234 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD3DP04234 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.81■□□□□ 0.12
CD3DP04234 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.81■□□□□ 0.12
CD3DP04234 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CD3DP04234 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.81■□□□□ 0.12
CD3DP04234 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CD3DP04234 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CD3DP04234 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.81■□□□□ 0.12
CD3DP04234 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.81■□□□□ 0.12
CD3DP04234 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CD3DP04234 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD3DP04234 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD3DP04234 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD3DP04234 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD3DP04234 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.81■□□□□ 0.12
CD3DP04234 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD3DP04234 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.8■□□□□ 0.12
CD3DP04234 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD3DP04234 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.8■□□□□ 0.12
CD3DP04234 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD3DP04234 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CD3DP04234 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD3DP04234 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms