Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC11.62□□□□□ -0.55
APOBP04114 AC034236.2-201ENST00000606662 1610 ntBASIC11.62□□□□□ -0.55
APOBP04114 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
APOBP04114 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
APOBP04114 KRT18P27-201ENST00000427733 1299 ntBASIC11.61□□□□□ -0.55
APOBP04114 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC11.61□□□□□ -0.55
APOBP04114 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC11.61□□□□□ -0.55
APOBP04114 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC11.61□□□□□ -0.55
APOBP04114 PNMT-203ENST00000581428 677 ntTSL 2 BASIC11.61□□□□□ -0.55
APOBP04114 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
APOBP04114 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC11.61□□□□□ -0.55
APOBP04114 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOBP04114 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOBP04114 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
APOBP04114 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.61□□□□□ -0.55
APOBP04114 VENTXP7-201ENST00000475503 772 ntBASIC11.61□□□□□ -0.55
APOBP04114 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC11.61□□□□□ -0.55
APOBP04114 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
APOBP04114 TP73-AS1-210ENST00000637775 1455 ntBASIC11.61□□□□□ -0.55
APOBP04114 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOBP04114 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
APOBP04114 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
APOBP04114 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
APOBP04114 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOBP04114 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOBP04114 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOBP04114 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
APOBP04114 HIST2H3DP1-201ENST00000401004 416 ntBASIC11.61□□□□□ -0.55
APOBP04114 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC11.61□□□□□ -0.55
APOBP04114 DNAJB3-201ENST00000446806 729 ntBASIC11.61□□□□□ -0.55
APOBP04114 GUSBP12-201ENST00000513727 720 ntBASIC11.61□□□□□ -0.55
APOBP04114 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC11.61□□□□□ -0.55
APOBP04114 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
APOBP04114 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
APOBP04114 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
APOBP04114 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
APOBP04114 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
APOBP04114 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOBP04114 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
APOBP04114 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC11.61□□□□□ -0.55
APOBP04114 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOBP04114 AL357033.4-201ENST00000617703 1807 ntBASIC11.61□□□□□ -0.55
APOBP04114 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOBP04114 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
APOBP04114 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOBP04114 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
APOBP04114 AL591424.1-201ENST00000442569 1213 ntBASIC11.6□□□□□ -0.55
APOBP04114 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
APOBP04114 REEP1-209ENST00000541910 969 ntTSL 2 BASIC11.6□□□□□ -0.55
APOBP04114 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOBP04114 COPE-211ENST00000600932 1144 ntTSL 5 BASIC11.6□□□□□ -0.55
APOBP04114 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC11.6□□□□□ -0.55
APOBP04114 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOBP04114 KATNBL1P6-202ENST00000562413 1466 ntBASIC11.6□□□□□ -0.55
APOBP04114 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC11.6□□□□□ -0.55
APOBP04114 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
APOBP04114 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
APOBP04114 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOBP04114 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC11.6□□□□□ -0.55
APOBP04114 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC11.6□□□□□ -0.55
APOBP04114 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC11.6□□□□□ -0.55
APOBP04114 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC11.6□□□□□ -0.55
APOBP04114 AL596442.2-201ENST00000610240 980 ntBASIC11.6□□□□□ -0.55
APOBP04114 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC11.6□□□□□ -0.55
APOBP04114 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC11.6□□□□□ -0.55
APOBP04114 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC11.6□□□□□ -0.55
APOBP04114 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOBP04114 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOBP04114 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOBP04114 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
APOBP04114 KIRREL3-AS3-201ENST00000404882 831 ntBASIC11.6□□□□□ -0.55
APOBP04114 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
APOBP04114 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC11.6□□□□□ -0.55
APOBP04114 RPL28-205ENST00000558131 444 ntTSL 5 BASIC11.6□□□□□ -0.55
APOBP04114 AC145285.3-201ENST00000564603 959 ntBASIC11.6□□□□□ -0.55
APOBP04114 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC11.6□□□□□ -0.55
APOBP04114 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOBP04114 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
APOBP04114 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC11.6□□□□□ -0.55
APOBP04114 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC11.6□□□□□ -0.55
APOBP04114 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
APOBP04114 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
APOBP04114 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC11.6□□□□□ -0.55
APOBP04114 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
APOBP04114 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
APOBP04114 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOBP04114 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC11.59□□□□□ -0.55
APOBP04114 MTDHP3-201ENST00000594186 672 ntBASIC11.59□□□□□ -0.55
APOBP04114 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOBP04114 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
APOBP04114 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
APOBP04114 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC11.59□□□□□ -0.55
APOBP04114 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
APOBP04114 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
APOBP04114 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOBP04114 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC11.59□□□□□ -0.55
APOBP04114 AC020907.5-201ENST00000624372 1936 ntBASIC11.59□□□□□ -0.55
APOBP04114 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOBP04114 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
APOBP04114 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms