Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AL049637.2-201ENST00000641778 930 ntBASIC19.02■□□□□ 0.64
MT-ND3P03897 OR6D1P-202ENST00000641007 5290 ntBASIC19.02■□□□□ 0.64
MT-ND3P03897 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MT-ND3P03897 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MT-ND3P03897 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MT-ND3P03897 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MT-ND3P03897 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MT-ND3P03897 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
MT-ND3P03897 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.63
MT-ND3P03897 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
MT-ND3P03897 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.02■□□□□ 0.63
MT-ND3P03897 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.02■□□□□ 0.63
MT-ND3P03897 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
MT-ND3P03897 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND3P03897 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.01■□□□□ 0.63
MT-ND3P03897 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND3P03897 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
MT-ND3P03897 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND3P03897 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND3P03897 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND3P03897 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.01■□□□□ 0.63
MT-ND3P03897 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.01■□□□□ 0.63
MT-ND3P03897 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.01■□□□□ 0.63
MT-ND3P03897 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND3P03897 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND3P03897 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND3P03897 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MT-ND3P03897 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND3P03897 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND3P03897 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.01■□□□□ 0.63
MT-ND3P03897 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND3P03897 MIR4785-201ENST00000585005 73 ntBASIC19.01■□□□□ 0.63
MT-ND3P03897 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND3P03897 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND3P03897 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND3P03897 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
MT-ND3P03897 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND3P03897 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.01■□□□□ 0.63
MT-ND3P03897 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.01■□□□□ 0.63
MT-ND3P03897 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND3P03897 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND3P03897 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
MT-ND3P03897 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MT-ND3P03897 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
MT-ND3P03897 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19■□□□□ 0.63
MT-ND3P03897 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19■□□□□ 0.63
MT-ND3P03897 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19■□□□□ 0.63
MT-ND3P03897 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
MT-ND3P03897 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19■□□□□ 0.63
MT-ND3P03897 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MT-ND3P03897 AC073592.3-201ENST00000625118 1834 ntBASIC19■□□□□ 0.63
MT-ND3P03897 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19■□□□□ 0.63
MT-ND3P03897 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
MT-ND3P03897 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19■□□□□ 0.63
MT-ND3P03897 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MT-ND3P03897 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19■□□□□ 0.63
MT-ND3P03897 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19■□□□□ 0.63
MT-ND3P03897 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19■□□□□ 0.63
MT-ND3P03897 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
MT-ND3P03897 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MT-ND3P03897 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19■□□□□ 0.63
MT-ND3P03897 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19■□□□□ 0.63
MT-ND3P03897 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19■□□□□ 0.63
MT-ND3P03897 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MT-ND3P03897 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
MT-ND3P03897 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19■□□□□ 0.63
MT-ND3P03897 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
MT-ND3P03897 AC126763.1-201ENST00000552015 2118 ntBASIC19■□□□□ 0.63
MT-ND3P03897 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MT-ND3P03897 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MT-ND3P03897 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19■□□□□ 0.63
MT-ND3P03897 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19■□□□□ 0.63
MT-ND3P03897 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19■□□□□ 0.63
MT-ND3P03897 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19■□□□□ 0.63
MT-ND3P03897 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
MT-ND3P03897 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.99■□□□□ 0.63
MT-ND3P03897 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
MT-ND3P03897 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.99■□□□□ 0.63
MT-ND3P03897 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND3P03897 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND3P03897 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND3P03897 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
MT-ND3P03897 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND3P03897 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND3P03897 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND3P03897 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND3P03897 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.99■□□□□ 0.63
MT-ND3P03897 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND3P03897 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.99■□□□□ 0.63
MT-ND3P03897 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.99■□□□□ 0.63
MT-ND3P03897 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.99■□□□□ 0.63
MT-ND3P03897 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.99■□□□□ 0.63
MT-ND3P03897 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND3P03897 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.99■□□□□ 0.63
MT-ND3P03897 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND3P03897 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
MT-ND3P03897 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
MT-ND3P03897 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND3P03897 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
MT-ND3P03897 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms