Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 AC133681.1-201ENST00000465482 601 ntBASIC16.77■□□□□ 0.28
HLA-DQA2P01906 Z85996.1-201ENST00000494644 937 ntBASIC16.77■□□□□ 0.28
HLA-DQA2P01906 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 CD99P1-205ENST00000527459 561 ntBASIC16.77■□□□□ 0.28
HLA-DQA2P01906 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 AL445675.2-201ENST00000620291 557 ntBASIC16.77■□□□□ 0.28
HLA-DQA2P01906 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HLA-DQA2P01906 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
HLA-DQA2P01906 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-DQA2P01906 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-DQA2P01906 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
HLA-DQA2P01906 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-DQA2P01906 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.77■□□□□ 0.27
HLA-DQA2P01906 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-DQA2P01906 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.77■□□□□ 0.27
HLA-DQA2P01906 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
HLA-DQA2P01906 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-DQA2P01906 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DQA2P01906 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.76■□□□□ 0.27
HLA-DQA2P01906 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.76■□□□□ 0.27
HLA-DQA2P01906 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.76■□□□□ 0.27
HLA-DQA2P01906 HTR7P1-201ENST00000538670 1336 ntBASIC16.76■□□□□ 0.27
HLA-DQA2P01906 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.76■□□□□ 0.27
HLA-DQA2P01906 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DQA2P01906 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HLA-DQA2P01906 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DQA2P01906 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DQA2P01906 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.76■□□□□ 0.27
HLA-DQA2P01906 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DQA2P01906 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.76■□□□□ 0.27
HLA-DQA2P01906 NIFKP9-201ENST00000419265 221 ntBASIC16.76■□□□□ 0.27
HLA-DQA2P01906 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.76■□□□□ 0.27
HLA-DQA2P01906 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.76■□□□□ 0.27
HLA-DQA2P01906 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
HLA-DQA2P01906 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DQA2P01906 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.76■□□□□ 0.27
HLA-DQA2P01906 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.76■□□□□ 0.27
HLA-DQA2P01906 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DQA2P01906 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.76■□□□□ 0.27
HLA-DQA2P01906 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DQA2P01906 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
HLA-DQA2P01906 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HLA-DQA2P01906 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DQA2P01906 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DQA2P01906 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 AC128676.1-201ENST00000454392 318 ntBASIC16.75■□□□□ 0.27
HLA-DQA2P01906 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQA2P01906 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms