Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL596442.2-201ENST00000610240 980 ntBASIC18.71■□□□□ 0.59
PDGFBP01127 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.71■□□□□ 0.59
PDGFBP01127 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFBP01127 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.71■□□□□ 0.59
PDGFBP01127 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.71■□□□□ 0.59
PDGFBP01127 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFBP01127 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDGFBP01127 TP73-AS1-210ENST00000637775 1455 ntBASIC18.71■□□□□ 0.59
PDGFBP01127 HLA-J-201ENST00000462773 1622 ntBASIC18.71■□□□□ 0.58
PDGFBP01127 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.7■□□□□ 0.58
PDGFBP01127 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.7■□□□□ 0.58
PDGFBP01127 AL162377.1-201ENST00000618844 1793 ntBASIC18.7■□□□□ 0.58
PDGFBP01127 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.7■□□□□ 0.58
PDGFBP01127 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
PDGFBP01127 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PDGFBP01127 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFBP01127 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFBP01127 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFBP01127 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFBP01127 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFBP01127 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFBP01127 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFBP01127 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFBP01127 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFBP01127 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFBP01127 AC023274.1-201ENST00000418278 595 ntBASIC18.7■□□□□ 0.58
PDGFBP01127 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.7■□□□□ 0.58
PDGFBP01127 AC007967.2-201ENST00000432613 625 ntBASIC18.7■□□□□ 0.58
PDGFBP01127 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PDGFBP01127 CYMP-203ENST00000474680 1263 ntBASIC18.7■□□□□ 0.58
PDGFBP01127 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.7■□□□□ 0.58
PDGFBP01127 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFBP01127 MIR3180-4-201ENST00000582223 153 ntBASIC18.7■□□□□ 0.58
PDGFBP01127 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PDGFBP01127 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFBP01127 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PDGFBP01127 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFBP01127 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFBP01127 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PDGFBP01127 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFBP01127 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDGFBP01127 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.7■□□□□ 0.58
PDGFBP01127 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
PDGFBP01127 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.69■□□□□ 0.58
PDGFBP01127 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
PDGFBP01127 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFBP01127 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFBP01127 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFBP01127 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFBP01127 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
PDGFBP01127 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFBP01127 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFBP01127 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.69■□□□□ 0.58
PDGFBP01127 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.69■□□□□ 0.58
PDGFBP01127 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.69■□□□□ 0.58
PDGFBP01127 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFBP01127 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.69■□□□□ 0.58
PDGFBP01127 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFBP01127 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.69■□□□□ 0.58
PDGFBP01127 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.69■□□□□ 0.58
PDGFBP01127 AC005336.2-201ENST00000593183 939 ntBASIC18.69■□□□□ 0.58
PDGFBP01127 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.69■□□□□ 0.58
PDGFBP01127 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PDGFBP01127 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.69■□□□□ 0.58
PDGFBP01127 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFBP01127 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFBP01127 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.69■□□□□ 0.58
PDGFBP01127 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFBP01127 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFBP01127 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PDGFBP01127 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.69■□□□□ 0.58
PDGFBP01127 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFBP01127 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PDGFBP01127 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PDGFBP01127 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFBP01127 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.68■□□□□ 0.58
PDGFBP01127 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFBP01127 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFBP01127 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFBP01127 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFBP01127 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFBP01127 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFBP01127 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.68■□□□□ 0.58
PDGFBP01127 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.68■□□□□ 0.58
PDGFBP01127 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFBP01127 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.68■□□□□ 0.58
PDGFBP01127 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.68■□□□□ 0.58
PDGFBP01127 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.68■□□□□ 0.58
PDGFBP01127 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.68■□□□□ 0.58
PDGFBP01127 RFPL4AP1-201ENST00000530883 850 ntBASIC18.68■□□□□ 0.58
PDGFBP01127 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.68■□□□□ 0.58
PDGFBP01127 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.68■□□□□ 0.58
PDGFBP01127 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.68■□□□□ 0.58
PDGFBP01127 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.68■□□□□ 0.58
PDGFBP01127 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.68■□□□□ 0.58
PDGFBP01127 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDGFBP01127 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.68■□□□□ 0.58
PDGFBP01127 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PDGFBP01127 KRT89P-201ENST00000620027 1478 ntBASIC18.68■□□□□ 0.58
PDGFBP01127 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms