Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
ABCA1O95477 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
ABCA1O95477 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.61■□□□□ 0.09
ABCA1O95477 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
ABCA1O95477 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ABCA1O95477 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
ABCA1O95477 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ABCA1O95477 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ABCA1O95477 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.61■□□□□ 0.09
ABCA1O95477 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.61■□□□□ 0.09
ABCA1O95477 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.61■□□□□ 0.09
ABCA1O95477 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ABCA1O95477 AC093525.10-201ENST00000625130 1569 ntBASIC15.61■□□□□ 0.09
ABCA1O95477 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
ABCA1O95477 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.61■□□□□ 0.09
ABCA1O95477 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ABCA1O95477 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ABCA1O95477 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.6■□□□□ 0.09
ABCA1O95477 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ABCA1O95477 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ABCA1O95477 TPSP2-201ENST00000561760 610 ntBASIC15.6■□□□□ 0.09
ABCA1O95477 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.6■□□□□ 0.09
ABCA1O95477 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
ABCA1O95477 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.6■□□□□ 0.09
ABCA1O95477 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ABCA1O95477 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.6■□□□□ 0.09
ABCA1O95477 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ABCA1O95477 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ABCA1O95477 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ABCA1O95477 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.6■□□□□ 0.09
ABCA1O95477 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.6■□□□□ 0.09
ABCA1O95477 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ABCA1O95477 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ABCA1O95477 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ABCA1O95477 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ABCA1O95477 TSPY19P-201ENST00000418461 509 ntBASIC15.6■□□□□ 0.09
ABCA1O95477 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.6■□□□□ 0.09
ABCA1O95477 TSPY18P-201ENST00000441642 509 ntBASIC15.6■□□□□ 0.09
ABCA1O95477 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.6■□□□□ 0.09
ABCA1O95477 AC011498.5-201ENST00000592027 486 ntBASIC15.6■□□□□ 0.09
ABCA1O95477 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.6■□□□□ 0.09
ABCA1O95477 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
ABCA1O95477 GPAT2P1-201ENST00000444924 1672 ntBASIC15.6■□□□□ 0.09
ABCA1O95477 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
ABCA1O95477 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
ABCA1O95477 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCA1O95477 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCA1O95477 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.59■□□□□ 0.09
ABCA1O95477 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCA1O95477 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.59■□□□□ 0.09
ABCA1O95477 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCA1O95477 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCA1O95477 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ABCA1O95477 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
ABCA1O95477 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.59■□□□□ 0.09
ABCA1O95477 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
ABCA1O95477 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCA1O95477 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
ABCA1O95477 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ABCA1O95477 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCA1O95477 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.59■□□□□ 0.09
ABCA1O95477 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCA1O95477 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.59■□□□□ 0.09
ABCA1O95477 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
ABCA1O95477 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ABCA1O95477 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.59■□□□□ 0.09
ABCA1O95477 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ABCA1O95477 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCA1O95477 NUS1P1-201ENST00000446295 882 ntBASIC15.59■□□□□ 0.09
ABCA1O95477 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.59■□□□□ 0.09
ABCA1O95477 KRT18P31-201ENST00000506277 1292 ntBASIC15.59■□□□□ 0.09
ABCA1O95477 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ABCA1O95477 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.59■□□□□ 0.09
ABCA1O95477 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
ABCA1O95477 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCA1O95477 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ABCA1O95477 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
ABCA1O95477 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
ABCA1O95477 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC15.58■□□□□ 0.09
ABCA1O95477 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ABCA1O95477 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ABCA1O95477 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ABCA1O95477 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ABCA1O95477 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ABCA1O95477 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ABCA1O95477 MIR662-201ENST00000384847 95 ntBASIC15.58■□□□□ 0.08
ABCA1O95477 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.58■□□□□ 0.08
ABCA1O95477 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.58■□□□□ 0.08
ABCA1O95477 RNF126P1-202ENST00000569893 925 ntBASIC15.58■□□□□ 0.08
ABCA1O95477 AP002414.4-201ENST00000589764 1148 ntBASIC15.58■□□□□ 0.08
ABCA1O95477 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.58■□□□□ 0.08
ABCA1O95477 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.58■□□□□ 0.08
ABCA1O95477 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ABCA1O95477 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.58■□□□□ 0.08
ABCA1O95477 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ABCA1O95477 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ABCA1O95477 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
ABCA1O95477 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
ABCA1O95477 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.58■□□□□ 0.08
ABCA1O95477 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms