Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.75■□□□□ 0.27
UBL3O95164 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
UBL3O95164 FP475955.4-201ENST00000623131 1990 ntBASIC16.75■□□□□ 0.27
UBL3O95164 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
UBL3O95164 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBL3O95164 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBL3O95164 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
UBL3O95164 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBL3O95164 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBL3O95164 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
UBL3O95164 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.75■□□□□ 0.27
UBL3O95164 TSPY7P-201ENST00000431358 1114 ntBASIC16.75■□□□□ 0.27
UBL3O95164 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBL3O95164 AC116562.2-201ENST00000507042 360 ntBASIC16.75■□□□□ 0.27
UBL3O95164 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.75■□□□□ 0.27
UBL3O95164 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.75■□□□□ 0.27
UBL3O95164 MIR4497-201ENST00000583208 89 ntBASIC16.75■□□□□ 0.27
UBL3O95164 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBL3O95164 DGCR10-201ENST00000609839 495 ntBASIC16.75■□□□□ 0.27
UBL3O95164 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.75■□□□□ 0.27
UBL3O95164 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
UBL3O95164 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBL3O95164 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
UBL3O95164 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBL3O95164 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBL3O95164 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBL3O95164 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBL3O95164 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.75■□□□□ 0.27
UBL3O95164 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
UBL3O95164 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.75■□□□□ 0.27
UBL3O95164 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
UBL3O95164 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBL3O95164 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
UBL3O95164 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.75■□□□□ 0.27
UBL3O95164 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
UBL3O95164 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBL3O95164 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBL3O95164 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.74■□□□□ 0.27
UBL3O95164 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
UBL3O95164 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBL3O95164 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.74■□□□□ 0.27
UBL3O95164 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.74■□□□□ 0.27
UBL3O95164 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.74■□□□□ 0.27
UBL3O95164 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBL3O95164 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBL3O95164 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBL3O95164 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBL3O95164 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBL3O95164 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBL3O95164 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBL3O95164 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBL3O95164 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBL3O95164 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
UBL3O95164 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.74■□□□□ 0.27
UBL3O95164 FAM207BP-201ENST00000447172 505 ntBASIC16.74■□□□□ 0.27
UBL3O95164 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.74■□□□□ 0.27
UBL3O95164 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.74■□□□□ 0.27
UBL3O95164 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBL3O95164 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBL3O95164 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
UBL3O95164 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.74■□□□□ 0.27
UBL3O95164 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.74■□□□□ 0.27
UBL3O95164 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBL3O95164 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.74■□□□□ 0.27
UBL3O95164 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBL3O95164 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
UBL3O95164 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBL3O95164 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBL3O95164 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.73■□□□□ 0.27
UBL3O95164 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBL3O95164 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBL3O95164 FZD10-202ENST00000539839 3282 ntBASIC16.73■□□□□ 0.27
UBL3O95164 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.73■□□□□ 0.27
UBL3O95164 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
UBL3O95164 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
UBL3O95164 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBL3O95164 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBL3O95164 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.73■□□□□ 0.27
UBL3O95164 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBL3O95164 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
UBL3O95164 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
UBL3O95164 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBL3O95164 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
UBL3O95164 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.73■□□□□ 0.27
UBL3O95164 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.73■□□□□ 0.27
UBL3O95164 AC091390.4-202ENST00000476426 537 ntBASIC16.73■□□□□ 0.27
UBL3O95164 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.73■□□□□ 0.27
UBL3O95164 AP003071.4-201ENST00000562276 1284 ntBASIC16.73■□□□□ 0.27
UBL3O95164 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.73■□□□□ 0.27
UBL3O95164 AC130371.2-201ENST00000619443 611 ntBASIC16.73■□□□□ 0.27
UBL3O95164 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBL3O95164 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.73■□□□□ 0.27
UBL3O95164 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.73■□□□□ 0.27
UBL3O95164 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBL3O95164 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBL3O95164 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBL3O95164 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBL3O95164 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBL3O95164 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
UBL3O95164 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms