Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF254O75437 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF254O75437 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF254O75437 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF254O75437 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.54■□□□□ 0.24
ZNF254O75437 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
ZNF254O75437 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF254O75437 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF254O75437 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF254O75437 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF254O75437 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF254O75437 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF254O75437 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF254O75437 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.54■□□□□ 0.24
ZNF254O75437 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF254O75437 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF254O75437 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF254O75437 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF254O75437 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF254O75437 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF254O75437 AC133681.1-201ENST00000465482 601 ntBASIC16.54■□□□□ 0.24
ZNF254O75437 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF254O75437 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.54■□□□□ 0.24
ZNF254O75437 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
ZNF254O75437 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
ZNF254O75437 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.54■□□□□ 0.24
ZNF254O75437 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.54■□□□□ 0.24
ZNF254O75437 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.54■□□□□ 0.24
ZNF254O75437 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF254O75437 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
ZNF254O75437 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF254O75437 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ZNF254O75437 AP000997.3-201ENST00000623333 2250 ntBASIC16.54■□□□□ 0.24
ZNF254O75437 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF254O75437 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
ZNF254O75437 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF254O75437 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF254O75437 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF254O75437 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF254O75437 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
ZNF254O75437 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF254O75437 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF254O75437 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF254O75437 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF254O75437 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF254O75437 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF254O75437 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF254O75437 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF254O75437 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ZNF254O75437 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF254O75437 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF254O75437 AC068880.1-201ENST00000507289 2297 ntBASIC16.53■□□□□ 0.24
ZNF254O75437 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF254O75437 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF254O75437 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF254O75437 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF254O75437 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF254O75437 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF254O75437 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF254O75437 AL513477.1-201ENST00000602865 2407 ntBASIC16.53■□□□□ 0.24
ZNF254O75437 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF254O75437 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF254O75437 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF254O75437 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF254O75437 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
ZNF254O75437 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF254O75437 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
ZNF254O75437 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF254O75437 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF254O75437 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF254O75437 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF254O75437 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.53■□□□□ 0.24
ZNF254O75437 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF254O75437 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF254O75437 AC126763.1-201ENST00000552015 2118 ntBASIC16.53■□□□□ 0.24
ZNF254O75437 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF254O75437 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.53■□□□□ 0.24
ZNF254O75437 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.53■□□□□ 0.24
ZNF254O75437 AC068587.9-201ENST00000641814 219 ntBASIC16.53■□□□□ 0.24
ZNF254O75437 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF254O75437 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF254O75437 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.53■□□□□ 0.24
ZNF254O75437 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF254O75437 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF254O75437 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
ZNF254O75437 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.53■□□□□ 0.24
ZNF254O75437 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF254O75437 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZNF254O75437 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.53■□□□□ 0.24
ZNF254O75437 KRT8P3-201ENST00000519669 1449 ntBASIC16.53■□□□□ 0.24
ZNF254O75437 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
ZNF254O75437 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF254O75437 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF254O75437 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
ZNF254O75437 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF254O75437 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF254O75437 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF254O75437 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF254O75437 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZNF254O75437 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms