Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.77■■□□□ 1.08
CTNND1O60716 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
CTNND1O60716 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.76■■□□□ 1.07
CTNND1O60716 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.76■■□□□ 1.07
CTNND1O60716 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.76■■□□□ 1.07
CTNND1O60716 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND1O60716 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND1O60716 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND1O60716 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND1O60716 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND1O60716 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND1O60716 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND1O60716 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND1O60716 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND1O60716 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND1O60716 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND1O60716 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.76■■□□□ 1.07
CTNND1O60716 AC009078.2-202ENST00000463353 338 ntBASIC21.76■■□□□ 1.07
CTNND1O60716 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND1O60716 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND1O60716 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.76■■□□□ 1.07
CTNND1O60716 AC074051.2-201ENST00000565115 352 ntBASIC21.76■■□□□ 1.07
CTNND1O60716 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.76■■□□□ 1.07
CTNND1O60716 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.76■■□□□ 1.07
CTNND1O60716 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND1O60716 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND1O60716 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTNND1O60716 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.75■■□□□ 1.07
CTNND1O60716 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTNND1O60716 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CTNND1O60716 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTNND1O60716 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CTNND1O60716 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTNND1O60716 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTNND1O60716 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CTNND1O60716 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTNND1O60716 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CTNND1O60716 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTNND1O60716 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTNND1O60716 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.75■■□□□ 1.07
CTNND1O60716 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTNND1O60716 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.75■■□□□ 1.07
CTNND1O60716 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC21.75■■□□□ 1.07
CTNND1O60716 AC009065.1-201ENST00000564055 1225 ntBASIC21.75■■□□□ 1.07
CTNND1O60716 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.75■■□□□ 1.07
CTNND1O60716 Z69720.1-201ENST00000601483 472 ntBASIC21.75■■□□□ 1.07
CTNND1O60716 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CTNND1O60716 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CTNND1O60716 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTNND1O60716 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CTNND1O60716 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CTNND1O60716 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CTNND1O60716 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTNND1O60716 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CTNND1O60716 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTNND1O60716 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.74■■□□□ 1.07
CTNND1O60716 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CTNND1O60716 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTNND1O60716 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTNND1O60716 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTNND1O60716 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.74■■□□□ 1.07
CTNND1O60716 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.74■■□□□ 1.07
CTNND1O60716 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTNND1O60716 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTNND1O60716 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CTNND1O60716 RN7SL606P-201ENST00000472779 293 ntBASIC21.74■■□□□ 1.07
CTNND1O60716 GUSBP12-201ENST00000513727 720 ntBASIC21.74■■□□□ 1.07
CTNND1O60716 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.74■■□□□ 1.07
CTNND1O60716 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CTNND1O60716 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.74■■□□□ 1.07
CTNND1O60716 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.74■■□□□ 1.07
CTNND1O60716 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTNND1O60716 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.73■■□□□ 1.07
CTNND1O60716 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTNND1O60716 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTNND1O60716 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.73■■□□□ 1.07
CTNND1O60716 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CTNND1O60716 KRT89P-201ENST00000620027 1478 ntBASIC21.73■■□□□ 1.07
CTNND1O60716 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.73■■□□□ 1.07
CTNND1O60716 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTNND1O60716 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CTNND1O60716 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CTNND1O60716 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
CTNND1O60716 AC079781.3-201ENST00000449110 356 ntBASIC21.73■■□□□ 1.07
CTNND1O60716 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.73■■□□□ 1.07
CTNND1O60716 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.73■■□□□ 1.07
CTNND1O60716 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.73■■□□□ 1.07
CTNND1O60716 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CTNND1O60716 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.73■■□□□ 1.07
CTNND1O60716 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTNND1O60716 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.73■■□□□ 1.07
CTNND1O60716 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.73■■□□□ 1.07
CTNND1O60716 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTNND1O60716 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTNND1O60716 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
CTNND1O60716 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.73■■□□□ 1.07
CTNND1O60716 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
CTNND1O60716 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CTNND1O60716 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTNND1O60716 LINC00167-201ENST00000530583 1419 ntBASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms