Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.83■□□□□ 0.44
LCMT2O60294 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LCMT2O60294 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
LCMT2O60294 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.82■□□□□ 0.44
LCMT2O60294 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCMT2O60294 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LCMT2O60294 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LCMT2O60294 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCMT2O60294 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LCMT2O60294 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCMT2O60294 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCMT2O60294 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LCMT2O60294 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.82■□□□□ 0.44
LCMT2O60294 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LCMT2O60294 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCMT2O60294 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCMT2O60294 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LCMT2O60294 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.82■□□□□ 0.44
LCMT2O60294 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.82■□□□□ 0.44
LCMT2O60294 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.82■□□□□ 0.44
LCMT2O60294 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.82■□□□□ 0.44
LCMT2O60294 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.82■□□□□ 0.44
LCMT2O60294 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.82■□□□□ 0.44
LCMT2O60294 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCMT2O60294 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCMT2O60294 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCMT2O60294 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCMT2O60294 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.82■□□□□ 0.44
LCMT2O60294 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCMT2O60294 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCMT2O60294 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LCMT2O60294 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.82■□□□□ 0.44
LCMT2O60294 WIZP1-201ENST00000531444 2299 ntBASIC17.82■□□□□ 0.44
LCMT2O60294 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LCMT2O60294 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCMT2O60294 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LCMT2O60294 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCMT2O60294 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LCMT2O60294 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LCMT2O60294 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LCMT2O60294 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LCMT2O60294 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LCMT2O60294 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LCMT2O60294 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.81■□□□□ 0.44
LCMT2O60294 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LCMT2O60294 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LCMT2O60294 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LCMT2O60294 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LCMT2O60294 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
LCMT2O60294 KRT18P57-201ENST00000443599 1254 ntBASIC17.81■□□□□ 0.44
LCMT2O60294 ATP5G1P1-201ENST00000448724 379 ntBASIC17.81■□□□□ 0.44
LCMT2O60294 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LCMT2O60294 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
LCMT2O60294 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.81■□□□□ 0.44
LCMT2O60294 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.81■□□□□ 0.44
LCMT2O60294 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.81■□□□□ 0.44
LCMT2O60294 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.81■□□□□ 0.44
LCMT2O60294 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LCMT2O60294 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
LCMT2O60294 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LCMT2O60294 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.81■□□□□ 0.44
LCMT2O60294 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.81■□□□□ 0.44
LCMT2O60294 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LCMT2O60294 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.81■□□□□ 0.44
LCMT2O60294 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LCMT2O60294 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LCMT2O60294 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LCMT2O60294 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LCMT2O60294 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LCMT2O60294 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LCMT2O60294 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LCMT2O60294 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LCMT2O60294 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.8■□□□□ 0.44
LCMT2O60294 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.8■□□□□ 0.44
LCMT2O60294 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LCMT2O60294 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.8■□□□□ 0.44
LCMT2O60294 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LCMT2O60294 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.8■□□□□ 0.44
LCMT2O60294 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
LCMT2O60294 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.8■□□□□ 0.44
LCMT2O60294 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
LCMT2O60294 RCN1P1-201ENST00000400413 996 ntBASIC17.8■□□□□ 0.44
LCMT2O60294 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LCMT2O60294 KRT18P41-201ENST00000518924 1277 ntBASIC17.8■□□□□ 0.44
LCMT2O60294 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.8■□□□□ 0.44
LCMT2O60294 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.8■□□□□ 0.44
LCMT2O60294 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LCMT2O60294 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LCMT2O60294 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.8■□□□□ 0.44
LCMT2O60294 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LCMT2O60294 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
LCMT2O60294 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.8■□□□□ 0.44
LCMT2O60294 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LCMT2O60294 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LCMT2O60294 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LCMT2O60294 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LCMT2O60294 AC126763.1-201ENST00000552015 2118 ntBASIC17.8■□□□□ 0.44
LCMT2O60294 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LCMT2O60294 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.8■□□□□ 0.44
LCMT2O60294 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms