Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SLC28A2O43868 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A2O43868 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A2O43868 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC28A2O43868 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A2O43868 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.97■□□□□ 0.47
SLC28A2O43868 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC28A2O43868 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC28A2O43868 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.97■□□□□ 0.47
SLC28A2O43868 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SLC28A2O43868 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SLC28A2O43868 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SLC28A2O43868 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A2O43868 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SLC28A2O43868 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.97■□□□□ 0.47
SLC28A2O43868 AL359075.1-203ENST00000462729 1002 ntBASIC17.97■□□□□ 0.47
SLC28A2O43868 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A2O43868 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.97■□□□□ 0.47
SLC28A2O43868 AC116407.4-201ENST00000623319 1061 ntBASIC17.97■□□□□ 0.47
SLC28A2O43868 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A2O43868 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC28A2O43868 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SLC28A2O43868 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
SLC28A2O43868 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC28A2O43868 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A2O43868 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC28A2O43868 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A2O43868 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A2O43868 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC28A2O43868 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A2O43868 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC28A2O43868 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A2O43868 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A2O43868 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A2O43868 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A2O43868 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A2O43868 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SLC28A2O43868 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A2O43868 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A2O43868 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SLC28A2O43868 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A2O43868 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A2O43868 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A2O43868 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC28A2O43868 FDX1P1-201ENST00000449115 551 ntBASIC17.96■□□□□ 0.47
SLC28A2O43868 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC28A2O43868 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC28A2O43868 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.96■□□□□ 0.47
SLC28A2O43868 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.96■□□□□ 0.47
SLC28A2O43868 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A2O43868 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A2O43868 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SLC28A2O43868 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SLC28A2O43868 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A2O43868 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC28A2O43868 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SLC28A2O43868 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SLC28A2O43868 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SLC28A2O43868 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
SLC28A2O43868 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A2O43868 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A2O43868 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A2O43868 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC28A2O43868 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A2O43868 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A2O43868 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SLC28A2O43868 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SLC28A2O43868 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC28A2O43868 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
SLC28A2O43868 CCR12P-201ENST00000446203 998 ntBASIC17.95■□□□□ 0.46
SLC28A2O43868 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC28A2O43868 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.95■□□□□ 0.46
SLC28A2O43868 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A2O43868 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC28A2O43868 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A2O43868 AC141257.4-201ENST00000634557 245 ntBASIC17.95■□□□□ 0.46
SLC28A2O43868 AC136944.6-201ENST00000634818 245 ntBASIC17.95■□□□□ 0.46
SLC28A2O43868 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.95■□□□□ 0.46
SLC28A2O43868 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC28A2O43868 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SLC28A2O43868 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A2O43868 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A2O43868 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A2O43868 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A2O43868 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC28A2O43868 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC28A2O43868 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A2O43868 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A2O43868 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC28A2O43868 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SLC28A2O43868 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A2O43868 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A2O43868 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
SLC28A2O43868 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
SLC28A2O43868 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A2O43868 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A2O43868 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A2O43868 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A2O43868 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC28A2O43868 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms