Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.64■□□□□ 0.57
LDB2O43679 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LDB2O43679 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.64■□□□□ 0.57
LDB2O43679 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.64■□□□□ 0.57
LDB2O43679 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.64■□□□□ 0.57
LDB2O43679 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LDB2O43679 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
LDB2O43679 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LDB2O43679 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LDB2O43679 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LDB2O43679 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
LDB2O43679 MYLKP1-201ENST00000509077 1580 ntBASIC18.64■□□□□ 0.57
LDB2O43679 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LDB2O43679 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.63■□□□□ 0.57
LDB2O43679 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LDB2O43679 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LDB2O43679 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.63■□□□□ 0.57
LDB2O43679 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LDB2O43679 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.63■□□□□ 0.57
LDB2O43679 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LDB2O43679 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LDB2O43679 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LDB2O43679 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LDB2O43679 AC211429.1-201ENST00000415277 523 ntBASIC18.63■□□□□ 0.57
LDB2O43679 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LDB2O43679 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.63■□□□□ 0.57
LDB2O43679 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.63■□□□□ 0.57
LDB2O43679 AC128688.1-201ENST00000487626 519 ntBASIC18.63■□□□□ 0.57
LDB2O43679 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.63■□□□□ 0.57
LDB2O43679 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.63■□□□□ 0.57
LDB2O43679 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.63■□□□□ 0.57
LDB2O43679 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
LDB2O43679 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LDB2O43679 FAM87A-204ENST00000613235 858 ntBASIC18.63■□□□□ 0.57
LDB2O43679 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LDB2O43679 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LDB2O43679 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LDB2O43679 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LDB2O43679 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LDB2O43679 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
LDB2O43679 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LDB2O43679 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
LDB2O43679 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LDB2O43679 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LDB2O43679 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LDB2O43679 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDB2O43679 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDB2O43679 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LDB2O43679 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LDB2O43679 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDB2O43679 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDB2O43679 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.62■□□□□ 0.57
LDB2O43679 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LDB2O43679 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDB2O43679 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
LDB2O43679 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDB2O43679 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDB2O43679 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.62■□□□□ 0.57
LDB2O43679 AC087499.1-201ENST00000418141 1075 ntBASIC18.62■□□□□ 0.57
LDB2O43679 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDB2O43679 ECEL1P2-202ENST00000465689 757 ntBASIC18.62■□□□□ 0.57
LDB2O43679 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.62■□□□□ 0.57
LDB2O43679 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.62■□□□□ 0.57
LDB2O43679 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.62■□□□□ 0.57
LDB2O43679 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
LDB2O43679 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDB2O43679 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.62■□□□□ 0.57
LDB2O43679 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LDB2O43679 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.62■□□□□ 0.57
LDB2O43679 KRT8P50-201ENST00000562022 1438 ntBASIC18.62■□□□□ 0.57
LDB2O43679 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LDB2O43679 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LDB2O43679 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.62■□□□□ 0.57
LDB2O43679 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LDB2O43679 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDB2O43679 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDB2O43679 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LDB2O43679 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.62■□□□□ 0.57
LDB2O43679 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LDB2O43679 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LDB2O43679 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.62■□□□□ 0.57
LDB2O43679 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.62■□□□□ 0.57
LDB2O43679 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDB2O43679 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDB2O43679 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDB2O43679 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDB2O43679 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDB2O43679 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
LDB2O43679 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDB2O43679 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LDB2O43679 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDB2O43679 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.61■□□□□ 0.57
LDB2O43679 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LDB2O43679 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LDB2O43679 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LDB2O43679 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.61■□□□□ 0.57
LDB2O43679 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LDB2O43679 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.61■□□□□ 0.57
LDB2O43679 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.61■□□□□ 0.57
LDB2O43679 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms