Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.97■□□□□ 0.63
RIPK2O43353 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RIPK2O43353 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RIPK2O43353 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RIPK2O43353 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.96■□□□□ 0.63
RIPK2O43353 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RIPK2O43353 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RIPK2O43353 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RIPK2O43353 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RIPK2O43353 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RIPK2O43353 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RIPK2O43353 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RIPK2O43353 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.96■□□□□ 0.63
RIPK2O43353 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RIPK2O43353 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RIPK2O43353 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.96■□□□□ 0.63
RIPK2O43353 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.96■□□□□ 0.63
RIPK2O43353 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RIPK2O43353 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.96■□□□□ 0.63
RIPK2O43353 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RIPK2O43353 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RIPK2O43353 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.95■□□□□ 0.62
RIPK2O43353 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.95■□□□□ 0.62
RIPK2O43353 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RIPK2O43353 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RIPK2O43353 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RIPK2O43353 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RIPK2O43353 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RIPK2O43353 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.95■□□□□ 0.62
RIPK2O43353 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RIPK2O43353 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RIPK2O43353 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RIPK2O43353 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RIPK2O43353 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
RIPK2O43353 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RIPK2O43353 GUSBP6-202ENST00000438529 1198 ntBASIC18.95■□□□□ 0.62
RIPK2O43353 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.95■□□□□ 0.62
RIPK2O43353 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.95■□□□□ 0.62
RIPK2O43353 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RIPK2O43353 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
RIPK2O43353 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.95■□□□□ 0.62
RIPK2O43353 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RIPK2O43353 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RIPK2O43353 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RIPK2O43353 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RIPK2O43353 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RIPK2O43353 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RIPK2O43353 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RIPK2O43353 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RIPK2O43353 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RIPK2O43353 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RIPK2O43353 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RIPK2O43353 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RIPK2O43353 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RIPK2O43353 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RIPK2O43353 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RIPK2O43353 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.94■□□□□ 0.62
RIPK2O43353 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RIPK2O43353 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RIPK2O43353 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.94■□□□□ 0.62
RIPK2O43353 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RIPK2O43353 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.94■□□□□ 0.62
RIPK2O43353 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.94■□□□□ 0.62
RIPK2O43353 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RIPK2O43353 MIR4758-201ENST00000577688 71 ntBASIC18.94■□□□□ 0.62
RIPK2O43353 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.94■□□□□ 0.62
RIPK2O43353 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RIPK2O43353 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RIPK2O43353 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RIPK2O43353 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RIPK2O43353 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.94■□□□□ 0.62
RIPK2O43353 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RIPK2O43353 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.94■□□□□ 0.62
RIPK2O43353 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RIPK2O43353 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RIPK2O43353 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RIPK2O43353 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
RIPK2O43353 KRT8P3-201ENST00000519669 1449 ntBASIC18.93■□□□□ 0.62
RIPK2O43353 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RIPK2O43353 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RIPK2O43353 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RIPK2O43353 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.93■□□□□ 0.62
RIPK2O43353 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RIPK2O43353 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RIPK2O43353 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
RIPK2O43353 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.93■□□□□ 0.62
RIPK2O43353 Z85996.1-201ENST00000494644 937 ntBASIC18.93■□□□□ 0.62
RIPK2O43353 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.93■□□□□ 0.62
RIPK2O43353 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RIPK2O43353 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.93■□□□□ 0.62
RIPK2O43353 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.93■□□□□ 0.62
RIPK2O43353 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RIPK2O43353 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RIPK2O43353 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
RIPK2O43353 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
RIPK2O43353 SIRPAP1-201ENST00000448467 1770 ntBASIC18.93■□□□□ 0.62
RIPK2O43353 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
RIPK2O43353 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RIPK2O43353 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RIPK2O43353 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms