Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AC010203.1-204ENST00000548782 407 ntBASIC17.81■□□□□ 0.44
PCDH17O14917 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDH17O14917 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCDH17O14917 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH17O14917 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
PCDH17O14917 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH17O14917 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH17O14917 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH17O14917 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PCDH17O14917 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH17O14917 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH17O14917 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH17O14917 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDH17O14917 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PCDH17O14917 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH17O14917 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCDH17O14917 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH17O14917 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH17O14917 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH17O14917 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PCDH17O14917 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH17O14917 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH17O14917 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDH17O14917 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCDH17O14917 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH17O14917 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDH17O14917 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDH17O14917 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDH17O14917 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDH17O14917 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH17O14917 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDH17O14917 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH17O14917 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH17O14917 AL138966.2-201ENST00000621997 464 ntBASIC17.8■□□□□ 0.44
PCDH17O14917 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH17O14917 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCDH17O14917 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH17O14917 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH17O14917 AIRN-201ENST00000601203 4374 ntBASIC17.8■□□□□ 0.44
PCDH17O14917 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH17O14917 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDH17O14917 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDH17O14917 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH17O14917 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH17O14917 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDH17O14917 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDH17O14917 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH17O14917 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PCDH17O14917 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PCDH17O14917 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDH17O14917 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PCDH17O14917 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PCDH17O14917 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH17O14917 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH17O14917 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PCDH17O14917 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH17O14917 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDH17O14917 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.79■□□□□ 0.44
PCDH17O14917 TSPY23P-201ENST00000440136 739 ntBASIC17.79■□□□□ 0.44
PCDH17O14917 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.79■□□□□ 0.44
PCDH17O14917 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDH17O14917 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.79■□□□□ 0.44
PCDH17O14917 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.79■□□□□ 0.44
PCDH17O14917 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
PCDH17O14917 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH17O14917 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH17O14917 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH17O14917 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH17O14917 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH17O14917 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
PCDH17O14917 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH17O14917 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PCDH17O14917 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH17O14917 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PCDH17O14917 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
PCDH17O14917 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH17O14917 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDH17O14917 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH17O14917 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH17O14917 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH17O14917 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDH17O14917 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PCDH17O14917 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PCDH17O14917 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDH17O14917 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH17O14917 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH17O14917 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PCDH17O14917 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDH17O14917 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH17O14917 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PCDH17O14917 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDH17O14917 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH17O14917 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDH17O14917 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDH17O14917 AP003041.3-201ENST00000527151 707 ntBASIC17.78■□□□□ 0.44
PCDH17O14917 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDH17O14917 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDH17O14917 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
PCDH17O14917 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH17O14917 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms