Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
CAPN9O14815 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CAPN9O14815 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.69■□□□□ 0.74
CAPN9O14815 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN9O14815 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CAPN9O14815 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
CAPN9O14815 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.69■□□□□ 0.74
CAPN9O14815 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN9O14815 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN9O14815 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN9O14815 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.69■□□□□ 0.74
CAPN9O14815 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.69■□□□□ 0.74
CAPN9O14815 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.69■□□□□ 0.74
CAPN9O14815 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.69■□□□□ 0.74
CAPN9O14815 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN9O14815 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.69■□□□□ 0.74
CAPN9O14815 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN9O14815 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.69■□□□□ 0.74
CAPN9O14815 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.69■□□□□ 0.74
CAPN9O14815 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.69■□□□□ 0.74
CAPN9O14815 RCC2P3-201ENST00000418112 1537 ntBASIC19.69■□□□□ 0.74
CAPN9O14815 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN9O14815 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.69■□□□□ 0.74
CAPN9O14815 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN9O14815 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN9O14815 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CAPN9O14815 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN9O14815 GPAT2P1-201ENST00000444924 1672 ntBASIC19.68■□□□□ 0.74
CAPN9O14815 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CAPN9O14815 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CAPN9O14815 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN9O14815 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CAPN9O14815 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN9O14815 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
CAPN9O14815 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN9O14815 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN9O14815 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN9O14815 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.68■□□□□ 0.74
CAPN9O14815 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN9O14815 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN9O14815 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN9O14815 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.68■□□□□ 0.74
CAPN9O14815 HMGA1P5-201ENST00000412453 271 ntBASIC19.68■□□□□ 0.74
CAPN9O14815 MCCD1P1-208ENST00000445732 328 ntBASIC19.68■□□□□ 0.74
CAPN9O14815 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.68■□□□□ 0.74
CAPN9O14815 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.68■□□□□ 0.74
CAPN9O14815 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CAPN9O14815 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.68■□□□□ 0.74
CAPN9O14815 AC012306.2-201ENST00000609350 630 ntBASIC19.68■□□□□ 0.74
CAPN9O14815 AC005363.2-201ENST00000618631 242 ntBASIC19.68■□□□□ 0.74
CAPN9O14815 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.68■□□□□ 0.74
CAPN9O14815 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN9O14815 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CAPN9O14815 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
CAPN9O14815 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN9O14815 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN9O14815 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.68■□□□□ 0.74
CAPN9O14815 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN9O14815 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN9O14815 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN9O14815 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.68■□□□□ 0.74
CAPN9O14815 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN9O14815 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CAPN9O14815 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN9O14815 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN9O14815 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CAPN9O14815 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN9O14815 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN9O14815 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CAPN9O14815 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
CAPN9O14815 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN9O14815 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.67■□□□□ 0.74
CAPN9O14815 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN9O14815 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN9O14815 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.67■□□□□ 0.74
CAPN9O14815 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN9O14815 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.67■□□□□ 0.74
CAPN9O14815 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CAPN9O14815 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.67■□□□□ 0.74
CAPN9O14815 FAM87A-204ENST00000613235 858 ntBASIC19.67■□□□□ 0.74
CAPN9O14815 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CAPN9O14815 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN9O14815 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN9O14815 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN9O14815 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN9O14815 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN9O14815 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN9O14815 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CAPN9O14815 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.67■□□□□ 0.74
CAPN9O14815 KRT8P32-201ENST00000512863 1461 ntBASIC19.67■□□□□ 0.74
CAPN9O14815 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN9O14815 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN9O14815 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN9O14815 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.66■□□□□ 0.74
CAPN9O14815 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN9O14815 AC006333.2-201ENST00000607957 2099 ntBASIC19.66■□□□□ 0.74
CAPN9O14815 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN9O14815 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN9O14815 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN9O14815 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms