Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.38
AP3D1O14617 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
AP3D1O14617 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.46■□□□□ 0.38
AP3D1O14617 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.45■□□□□ 0.38
AP3D1O14617 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3D1O14617 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
AP3D1O14617 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP3D1O14617 PKD1P1-201ENST00000458669 6805 ntBASIC17.45■□□□□ 0.38
AP3D1O14617 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3D1O14617 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3D1O14617 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP3D1O14617 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.45■□□□□ 0.38
AP3D1O14617 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
AP3D1O14617 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3D1O14617 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3D1O14617 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3D1O14617 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP3D1O14617 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.45■□□□□ 0.38
AP3D1O14617 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3D1O14617 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.45■□□□□ 0.38
AP3D1O14617 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.45■□□□□ 0.38
AP3D1O14617 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP3D1O14617 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3D1O14617 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3D1O14617 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
AP3D1O14617 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3D1O14617 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3D1O14617 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3D1O14617 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3D1O14617 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP3D1O14617 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.45■□□□□ 0.38
AP3D1O14617 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.45■□□□□ 0.38
AP3D1O14617 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3D1O14617 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP3D1O14617 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3D1O14617 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP3D1O14617 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3D1O14617 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP3D1O14617 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
AP3D1O14617 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3D1O14617 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3D1O14617 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
AP3D1O14617 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3D1O14617 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
AP3D1O14617 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3D1O14617 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3D1O14617 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.44■□□□□ 0.38
AP3D1O14617 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3D1O14617 ABHD17AP1-201ENST00000358206 933 ntBASIC17.44■□□□□ 0.38
AP3D1O14617 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
AP3D1O14617 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.44■□□□□ 0.38
AP3D1O14617 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3D1O14617 AL158047.1-201ENST00000445918 881 ntBASIC17.44■□□□□ 0.38
AP3D1O14617 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP3D1O14617 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.44■□□□□ 0.38
AP3D1O14617 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3D1O14617 AC142381.4-202ENST00000563973 229 ntBASIC17.44■□□□□ 0.38
AP3D1O14617 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.44■□□□□ 0.38
AP3D1O14617 AF186192.3-201ENST00000583427 947 ntBASIC17.44■□□□□ 0.38
AP3D1O14617 AL353708.3-201ENST00000610272 989 ntBASIC17.44■□□□□ 0.38
AP3D1O14617 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.44■□□□□ 0.38
AP3D1O14617 AC009113.1-201ENST00000570267 2443 ntBASIC17.44■□□□□ 0.38
AP3D1O14617 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3D1O14617 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3D1O14617 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3D1O14617 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP3D1O14617 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.44■□□□□ 0.38
AP3D1O14617 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
AP3D1O14617 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP3D1O14617 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP3D1O14617 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP3D1O14617 ANO7L1-203ENST00000602586 1720 ntBASIC17.44■□□□□ 0.38
AP3D1O14617 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3D1O14617 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP3D1O14617 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
AP3D1O14617 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3D1O14617 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3D1O14617 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.43■□□□□ 0.38
AP3D1O14617 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.43■□□□□ 0.38
AP3D1O14617 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3D1O14617 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP3D1O14617 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP3D1O14617 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3D1O14617 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3D1O14617 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3D1O14617 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3D1O14617 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3D1O14617 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3D1O14617 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3D1O14617 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3D1O14617 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3D1O14617 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
AP3D1O14617 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.43■□□□□ 0.38
AP3D1O14617 KSR1P1-201ENST00000446298 240 ntBASIC17.43■□□□□ 0.38
AP3D1O14617 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP3D1O14617 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.43■□□□□ 0.38
AP3D1O14617 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.43■□□□□ 0.38
AP3D1O14617 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
AP3D1O14617 AC131212.4-201ENST00000623606 975 ntBASIC17.43■□□□□ 0.38
AP3D1O14617 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms