Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CDC7O00311 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC7O00311 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC7O00311 GPAT2P1-201ENST00000444924 1672 ntBASIC18.32■□□□□ 0.52
CDC7O00311 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDC7O00311 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDC7O00311 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC7O00311 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC7O00311 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDC7O00311 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC7O00311 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDC7O00311 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.32■□□□□ 0.52
CDC7O00311 TSPY7P-201ENST00000431358 1114 ntBASIC18.32■□□□□ 0.52
CDC7O00311 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC7O00311 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.32■□□□□ 0.52
CDC7O00311 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.32■□□□□ 0.52
CDC7O00311 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.32■□□□□ 0.52
CDC7O00311 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDC7O00311 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC7O00311 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDC7O00311 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDC7O00311 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDC7O00311 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC7O00311 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC7O00311 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC7O00311 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDC7O00311 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDC7O00311 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC7O00311 AL109659.2-201ENST00000606809 1674 ntBASIC18.31■□□□□ 0.52
CDC7O00311 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
CDC7O00311 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC7O00311 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDC7O00311 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC7O00311 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDC7O00311 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC7O00311 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.31■□□□□ 0.52
CDC7O00311 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.31■□□□□ 0.52
CDC7O00311 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC7O00311 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDC7O00311 AL023284.2-201ENST00000405850 579 ntBASIC18.31■□□□□ 0.52
CDC7O00311 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.31■□□□□ 0.52
CDC7O00311 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.31■□□□□ 0.52
CDC7O00311 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.31■□□□□ 0.52
CDC7O00311 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CDC7O00311 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.31■□□□□ 0.52
CDC7O00311 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDC7O00311 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDC7O00311 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC7O00311 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC7O00311 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC7O00311 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.31■□□□□ 0.52
CDC7O00311 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDC7O00311 KRT8P45-201ENST00000414328 1447 ntBASIC18.31■□□□□ 0.52
CDC7O00311 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC7O00311 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDC7O00311 AL354751.1-201ENST00000412768 1863 ntBASIC18.31■□□□□ 0.52
CDC7O00311 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC7O00311 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDC7O00311 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CDC7O00311 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC7O00311 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDC7O00311 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC7O00311 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CDC7O00311 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC7O00311 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC7O00311 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC7O00311 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDC7O00311 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC7O00311 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC7O00311 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC7O00311 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CDC7O00311 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC7O00311 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CDC7O00311 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC7O00311 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC7O00311 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC7O00311 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDC7O00311 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC7O00311 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.3■□□□□ 0.52
CDC7O00311 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.3■□□□□ 0.52
CDC7O00311 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.3■□□□□ 0.52
CDC7O00311 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC7O00311 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC7O00311 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.3■□□□□ 0.52
CDC7O00311 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.3■□□□□ 0.52
CDC7O00311 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDC7O00311 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDC7O00311 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.3■□□□□ 0.52
CDC7O00311 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC7O00311 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC7O00311 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDC7O00311 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC7O00311 AC112777.1-201ENST00000540175 1423 ntBASIC18.3■□□□□ 0.52
CDC7O00311 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
CDC7O00311 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.29■□□□□ 0.52
CDC7O00311 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDC7O00311 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDC7O00311 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDC7O00311 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDC7O00311 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms