Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CACNB4O00305 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.42■□□□□ 0.54
CACNB4O00305 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CACNB4O00305 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNB4O00305 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CACNB4O00305 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNB4O00305 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB4O00305 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB4O00305 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB4O00305 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB4O00305 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB4O00305 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB4O00305 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB4O00305 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB4O00305 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CACNB4O00305 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.41■□□□□ 0.54
CACNB4O00305 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB4O00305 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB4O00305 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB4O00305 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB4O00305 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB4O00305 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB4O00305 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.41■□□□□ 0.54
CACNB4O00305 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB4O00305 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.41■□□□□ 0.54
CACNB4O00305 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.41■□□□□ 0.54
CACNB4O00305 MIR3917-201ENST00000580971 93 ntBASIC18.41■□□□□ 0.54
CACNB4O00305 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CACNB4O00305 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB4O00305 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.41■□□□□ 0.54
CACNB4O00305 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB4O00305 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CACNB4O00305 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB4O00305 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB4O00305 AL161938.1-201ENST00000569833 2180 ntBASIC18.41■□□□□ 0.54
CACNB4O00305 AC120498.9-201ENST00000339021 3867 ntBASIC18.41■□□□□ 0.54
CACNB4O00305 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB4O00305 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CACNB4O00305 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CACNB4O00305 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB4O00305 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB4O00305 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB4O00305 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNB4O00305 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB4O00305 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB4O00305 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB4O00305 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB4O00305 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CACNB4O00305 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB4O00305 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.4■□□□□ 0.54
CACNB4O00305 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB4O00305 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.4■□□□□ 0.54
CACNB4O00305 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB4O00305 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNB4O00305 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB4O00305 AC104390.1-201ENST00000555663 520 ntBASIC18.4■□□□□ 0.54
CACNB4O00305 AL157888.1-201ENST00000631930 593 ntBASIC18.4■□□□□ 0.54
CACNB4O00305 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.4■□□□□ 0.54
CACNB4O00305 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB4O00305 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB4O00305 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CACNB4O00305 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNB4O00305 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
CACNB4O00305 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNB4O00305 AC005332.1-201ENST00000577698 1310 ntBASIC18.4■□□□□ 0.54
CACNB4O00305 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB4O00305 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB4O00305 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB4O00305 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB4O00305 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB4O00305 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNB4O00305 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNB4O00305 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNB4O00305 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNB4O00305 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNB4O00305 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CACNB4O00305 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CACNB4O00305 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.39■□□□□ 0.54
CACNB4O00305 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNB4O00305 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.39■□□□□ 0.53
CACNB4O00305 HEIH-201ENST00000623091 1652 ntBASIC18.39■□□□□ 0.53
CACNB4O00305 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNB4O00305 HBZP1-201ENST00000354915 429 ntBASIC18.39■□□□□ 0.53
CACNB4O00305 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNB4O00305 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.39■□□□□ 0.53
CACNB4O00305 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.39■□□□□ 0.53
CACNB4O00305 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.39■□□□□ 0.53
CACNB4O00305 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CACNB4O00305 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.39■□□□□ 0.53
CACNB4O00305 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.39■□□□□ 0.53
CACNB4O00305 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.39■□□□□ 0.53
CACNB4O00305 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.39■□□□□ 0.53
CACNB4O00305 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.39■□□□□ 0.53
CACNB4O00305 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CACNB4O00305 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
CACNB4O00305 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNB4O00305 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.39■□□□□ 0.53
CACNB4O00305 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.39■□□□□ 0.53
CACNB4O00305 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNB4O00305 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms