Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
DFFAO00273 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DFFAO00273 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DFFAO00273 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
DFFAO00273 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DFFAO00273 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DFFAO00273 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
DFFAO00273 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DFFAO00273 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DFFAO00273 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DFFAO00273 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DFFAO00273 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DFFAO00273 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
DFFAO00273 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
DFFAO00273 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.16■□□□□ 0.66
DFFAO00273 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.16■□□□□ 0.66
DFFAO00273 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
DFFAO00273 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.16■□□□□ 0.66
DFFAO00273 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DFFAO00273 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DFFAO00273 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.16■□□□□ 0.66
DFFAO00273 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.16■□□□□ 0.66
DFFAO00273 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DFFAO00273 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
DFFAO00273 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
DFFAO00273 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.16■□□□□ 0.66
DFFAO00273 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DFFAO00273 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.15■□□□□ 0.66
DFFAO00273 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DFFAO00273 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.15■□□□□ 0.66
DFFAO00273 AL499627.1-201ENST00000569373 2188 ntBASIC19.15■□□□□ 0.66
DFFAO00273 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
DFFAO00273 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
DFFAO00273 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DFFAO00273 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
DFFAO00273 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.15■□□□□ 0.66
DFFAO00273 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
DFFAO00273 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.15■□□□□ 0.66
DFFAO00273 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.15■□□□□ 0.66
DFFAO00273 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
DFFAO00273 CR769767.2-201ENST00000622735 460 ntBASIC19.15■□□□□ 0.66
DFFAO00273 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DFFAO00273 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.15■□□□□ 0.66
DFFAO00273 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DFFAO00273 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DFFAO00273 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
DFFAO00273 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DFFAO00273 KRT8P45-201ENST00000414328 1447 ntBASIC19.15■□□□□ 0.66
DFFAO00273 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DFFAO00273 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.15■□□□□ 0.66
DFFAO00273 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.15■□□□□ 0.66
DFFAO00273 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DFFAO00273 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
DFFAO00273 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
DFFAO00273 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
DFFAO00273 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.14■□□□□ 0.66
DFFAO00273 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.14■□□□□ 0.66
DFFAO00273 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DFFAO00273 BCL2-203ENST00000589955 5011 ntBASIC19.14■□□□□ 0.65
DFFAO00273 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.14■□□□□ 0.65
DFFAO00273 HMGA1P5-201ENST00000412453 271 ntBASIC19.14■□□□□ 0.65
DFFAO00273 AC211429.1-201ENST00000415277 523 ntBASIC19.14■□□□□ 0.65
DFFAO00273 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.14■□□□□ 0.65
DFFAO00273 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.14■□□□□ 0.65
DFFAO00273 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.14■□□□□ 0.65
DFFAO00273 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.14■□□□□ 0.65
DFFAO00273 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
DFFAO00273 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DFFAO00273 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DFFAO00273 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
DFFAO00273 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.14■□□□□ 0.65
DFFAO00273 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
DFFAO00273 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
DFFAO00273 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
DFFAO00273 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DFFAO00273 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DFFAO00273 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
DFFAO00273 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
DFFAO00273 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
DFFAO00273 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
DFFAO00273 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
DFFAO00273 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DFFAO00273 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
DFFAO00273 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
DFFAO00273 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
DFFAO00273 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
DFFAO00273 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DFFAO00273 MIR564-202ENST00000385049 94 ntBASIC19.13■□□□□ 0.65
DFFAO00273 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.13■□□□□ 0.65
DFFAO00273 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.13■□□□□ 0.65
DFFAO00273 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.13■□□□□ 0.65
DFFAO00273 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.13■□□□□ 0.65
DFFAO00273 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.13■□□□□ 0.65
DFFAO00273 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DFFAO00273 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
DFFAO00273 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DFFAO00273 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DFFAO00273 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
DFFAO00273 WIZP1-201ENST00000531444 2299 ntBASIC19.13■□□□□ 0.65
DFFAO00273 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms