Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.86■□□□□ 0.61
AP3B1O00203 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP3B1O00203 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP3B1O00203 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
AP3B1O00203 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
AP3B1O00203 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.86■□□□□ 0.61
AP3B1O00203 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.86■□□□□ 0.61
AP3B1O00203 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP3B1O00203 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP3B1O00203 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP3B1O00203 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP3B1O00203 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.86■□□□□ 0.61
AP3B1O00203 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
AP3B1O00203 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
AP3B1O00203 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP3B1O00203 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
AP3B1O00203 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.85■□□□□ 0.61
AP3B1O00203 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AP3B1O00203 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AP3B1O00203 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP3B1O00203 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AP3B1O00203 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP3B1O00203 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP3B1O00203 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP3B1O00203 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.85■□□□□ 0.61
AP3B1O00203 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.85■□□□□ 0.61
AP3B1O00203 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.85■□□□□ 0.61
AP3B1O00203 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.85■□□□□ 0.61
AP3B1O00203 MCCD1P1-208ENST00000445732 328 ntBASIC18.85■□□□□ 0.61
AP3B1O00203 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.85■□□□□ 0.61
AP3B1O00203 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
AP3B1O00203 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.85■□□□□ 0.61
AP3B1O00203 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP3B1O00203 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
AP3B1O00203 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.84■□□□□ 0.61
AP3B1O00203 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP3B1O00203 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
AP3B1O00203 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP3B1O00203 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP3B1O00203 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP3B1O00203 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP3B1O00203 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP3B1O00203 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.84■□□□□ 0.61
AP3B1O00203 MIR564-202ENST00000385049 94 ntBASIC18.84■□□□□ 0.61
AP3B1O00203 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
AP3B1O00203 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.84■□□□□ 0.61
AP3B1O00203 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.84■□□□□ 0.61
AP3B1O00203 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AP3B1O00203 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AP3B1O00203 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.84■□□□□ 0.61
AP3B1O00203 AC113410.3-201ENST00000623366 203 ntBASIC18.84■□□□□ 0.61
AP3B1O00203 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP3B1O00203 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
AP3B1O00203 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP3B1O00203 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AP3B1O00203 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
AP3B1O00203 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP3B1O00203 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.84■□□□□ 0.61
AP3B1O00203 MYLKP1-201ENST00000509077 1580 ntBASIC18.84■□□□□ 0.61
AP3B1O00203 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
AP3B1O00203 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP3B1O00203 AL354751.1-201ENST00000412768 1863 ntBASIC18.84■□□□□ 0.61
AP3B1O00203 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP3B1O00203 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP3B1O00203 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
AP3B1O00203 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.83■□□□□ 0.61
AP3B1O00203 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.83■□□□□ 0.61
AP3B1O00203 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
AP3B1O00203 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.83■□□□□ 0.61
AP3B1O00203 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
AP3B1O00203 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
AP3B1O00203 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
AP3B1O00203 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.83■□□□□ 0.61
AP3B1O00203 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
AP3B1O00203 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP3B1O00203 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.83■□□□□ 0.6
AP3B1O00203 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.83■□□□□ 0.6
AP3B1O00203 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP3B1O00203 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.83■□□□□ 0.6
AP3B1O00203 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.83■□□□□ 0.6
AP3B1O00203 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.83■□□□□ 0.6
AP3B1O00203 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.83■□□□□ 0.6
AP3B1O00203 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.83■□□□□ 0.6
AP3B1O00203 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.83■□□□□ 0.6
AP3B1O00203 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AP3B1O00203 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP3B1O00203 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP3B1O00203 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.83■□□□□ 0.6
AP3B1O00203 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP3B1O00203 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.83■□□□□ 0.6
AP3B1O00203 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP3B1O00203 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP3B1O00203 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP3B1O00203 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.83■□□□□ 0.6
AP3B1O00203 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP3B1O00203 ABALON-201ENST00000629058 1903 ntBASIC18.82■□□□□ 0.6
AP3B1O00203 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP3B1O00203 AC034236.2-201ENST00000606662 1610 ntBASIC18.82■□□□□ 0.6
AP3B1O00203 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.82■□□□□ 0.6
AP3B1O00203 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms