Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 AL357033.4-201ENST00000617703 1807 ntBASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.66■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.66■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.66■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.66■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 AP000593.1-201ENST00000393668 712 ntBASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 PVRIG2P-201ENST00000435460 978 ntBASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.65■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 MTMR9LP-203ENST00000426597 1545 ntBASIC18.64■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 AL162741.1-201ENST00000565563 1558 ntBASIC18.64■□□□□ 0.58
C1QTNF3-AMACRE9PGA6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 HCG4P8-203ENST00000443049 980 ntBASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms