Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.27■□□□□ 0.2
SHISA3A0PJX4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.27■□□□□ 0.2
SHISA3A0PJX4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHISA3A0PJX4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHISA3A0PJX4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHISA3A0PJX4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SHISA3A0PJX4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SHISA3A0PJX4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SHISA3A0PJX4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.27■□□□□ 0.19
SHISA3A0PJX4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.27■□□□□ 0.19
SHISA3A0PJX4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SHISA3A0PJX4 AC112777.1-201ENST00000540175 1423 ntBASIC16.27■□□□□ 0.19
SHISA3A0PJX4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SHISA3A0PJX4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SHISA3A0PJX4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SHISA3A0PJX4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.27■□□□□ 0.19
SHISA3A0PJX4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 FLJ13224-201ENST00000313737 1514 ntBASIC16.26■□□□□ 0.19
SHISA3A0PJX4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 DUSP5P2-201ENST00000426873 1033 ntBASIC16.26■□□□□ 0.19
SHISA3A0PJX4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHISA3A0PJX4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.25■□□□□ 0.19
SHISA3A0PJX4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 AC105036.2-201ENST00000569468 176 ntBASIC16.25■□□□□ 0.19
SHISA3A0PJX4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 AD000864.1-201ENST00000624076 2295 ntBASIC16.25■□□□□ 0.19
SHISA3A0PJX4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHISA3A0PJX4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SHISA3A0PJX4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms