Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV27A0A0K0K1C4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV27A0A0K0K1C4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV27A0A0K0K1C4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV27A0A0K0K1C4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
TRBV27A0A0K0K1C4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TRBV27A0A0K0K1C4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 SLC29A4P2-201ENST00000504749 1089 ntBASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 PNMA6B-201ENST00000538162 1200 ntBASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 AC060766.5-201ENST00000590539 871 ntBASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRBV27A0A0K0K1C4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 FLJ13224-201ENST00000313737 1514 ntBASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 AC008556.1-201ENST00000610908 2040 ntBASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 C1QL1P1-201ENST00000568105 661 ntBASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 AL121832.2-201ENST00000610979 668 ntBASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 OR6D1P-202ENST00000641007 5290 ntBASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 KRT8P3-201ENST00000519669 1449 ntBASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV27A0A0K0K1C4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TRBV27A0A0K0K1C4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms