Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 Z85996.1-201ENST00000494644 937 ntBASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 AP003097.1-201ENST00000530657 1135 ntBASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 AC069544.1-201ENST00000609399 999 ntBASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 AC134043.2-201ENST00000624206 2238 ntBASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV6-7A0A0A0MS04 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 AC124067.4-201ENST00000519691 2379 ntBASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 POU5F1P3-201ENST00000428824 1078 ntBASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.62■□□□□ 0.09
TRBV6-7A0A0A0MS04 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 KRT16P5-201ENST00000455284 522 ntBASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV6-7A0A0A0MS04 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms