Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV9-2A0A087WT02 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV9-2A0A087WT02 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV9-2A0A087WT02 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
TRAV9-2A0A087WT02 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 AL118508.1-201ENST00000613502 2345 ntBASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRAV9-2A0A087WT02 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC13.9□□□□□ -0.19
TRAV9-2A0A087WT02 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TRAV9-2A0A087WT02 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC13.9□□□□□ -0.19
TRAV9-2A0A087WT02 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC13.9□□□□□ -0.19
TRAV9-2A0A087WT02 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 APTR-205ENST00000447009 902 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 CICP6-201ENST00000457191 2729 ntBASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 AL512353.2-201ENST00000448759 1962 ntBASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV9-2A0A087WT02 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV9-2A0A087WT02 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV9-2A0A087WT02 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV9-2A0A087WT02 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV9-2A0A087WT02 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV9-2A0A087WT02 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV9-2A0A087WT02 PXK-206ENST00000463280 2825 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV9-2A0A087WT02 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV9-2A0A087WT02 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV9-2A0A087WT02 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV9-2A0A087WT02 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV9-2A0A087WT02 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV9-2A0A087WT02 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV9-2A0A087WT02 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV9-2A0A087WT02 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV9-2A0A087WT02 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV9-2A0A087WT02 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV9-2A0A087WT02 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms