Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LINC01558Q9Y6Z2 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 ANKRD18DP-204ENST00000455355 1975 ntBASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 AC104640.1-201ENST00000562617 2109 ntBASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
LINC01558Q9Y6Z2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 FAM45BP-202ENST00000592932 1624 ntBASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 AC024909.3-201ENST00000611513 2257 ntBASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC9.67□□□□□ -0.86
LINC01558Q9Y6Z2 GAK-223ENST00000628912 497 ntTSL 5 BASIC9.67□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms