Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGA11Q9Y5H2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA11Q9Y5H2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.13■□□□□ 0.49
PCDHGA11Q9Y5H2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
PCDHGA11Q9Y5H2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHGA11Q9Y5H2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHGA11Q9Y5H2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGA11Q9Y5H2 TMEM191A-211ENST00000637163 1067 ntBASIC18.13■□□□□ 0.49
PCDHGA11Q9Y5H2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA11Q9Y5H2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA11Q9Y5H2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA11Q9Y5H2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA11Q9Y5H2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGA11Q9Y5H2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGA11Q9Y5H2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGA11Q9Y5H2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 HCG11-201ENST00000411553 5696 ntBASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 PCDHB18P-201ENST00000524813 2368 ntBASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 AC068587.9-201ENST00000641814 219 ntBASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 WIZP1-201ENST00000531444 2299 ntBASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 AC096733.2-201ENST00000609937 1394 ntBASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 AC138932.1-201ENST00000534164 6830 ntBASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 LTB4R2-202ENST00000528054 3092 ntBASIC18.12■□□□□ 0.49
PCDHGA11Q9Y5H2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 MIR718-201ENST00000390190 70 ntBASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 AL355355.2-201ENST00000442321 338 ntBASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDHGA11Q9Y5H2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PCDHGA11Q9Y5H2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms