Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 CCR12P-201ENST00000446203 998 ntBASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 COX11P1-201ENST00000489116 835 ntBASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PCDHB1Q9Y5F3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 HEIH-201ENST00000623091 1652 ntBASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 AC007663.1-201ENST00000438948 1240 ntBASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 AP000550.4-202ENST00000639755 178 ntBASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHB1Q9Y5F3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 KRT8P32-201ENST00000512863 1461 ntBASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 AC009947.2-201ENST00000444014 672 ntBASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 AC068587.9-201ENST00000641814 219 ntBASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 AL020996.1-203ENST00000536896 2307 ntBASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PCDHB1Q9Y5F3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB1Q9Y5F3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCDHB1Q9Y5F3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB1Q9Y5F3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB1Q9Y5F3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHB1Q9Y5F3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB1Q9Y5F3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB1Q9Y5F3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB1Q9Y5F3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHB1Q9Y5F3 SLC25A1P2-201ENST00000430693 912 ntBASIC18.65■□□□□ 0.58
PCDHB1Q9Y5F3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB1Q9Y5F3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHB1Q9Y5F3 KRT126P-201ENST00000549467 1181 ntBASIC18.65■□□□□ 0.58
PCDHB1Q9Y5F3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.65■□□□□ 0.58
PCDHB1Q9Y5F3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
PCDHB1Q9Y5F3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHB1Q9Y5F3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHB1Q9Y5F3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB1Q9Y5F3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB1Q9Y5F3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB1Q9Y5F3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHB1Q9Y5F3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDHB1Q9Y5F3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB1Q9Y5F3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB1Q9Y5F3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHB1Q9Y5F3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms