Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HCN4Q9Y3Q4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HCN4Q9Y3Q4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.11■□□□□ 0.65
HCN4Q9Y3Q4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.11■□□□□ 0.65
HCN4Q9Y3Q4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
HCN4Q9Y3Q4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HCN4Q9Y3Q4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HCN4Q9Y3Q4 KRT16P6-202ENST00000425692 1426 ntBASIC19.11■□□□□ 0.65
HCN4Q9Y3Q4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.11■□□□□ 0.65
HCN4Q9Y3Q4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HCN4Q9Y3Q4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HCN4Q9Y3Q4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HCN4Q9Y3Q4 AL645939.2-201ENST00000427340 991 ntBASIC19.11■□□□□ 0.65
HCN4Q9Y3Q4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.11■□□□□ 0.65
HCN4Q9Y3Q4 KRT18P3-201ENST00000451602 1288 ntBASIC19.11■□□□□ 0.65
HCN4Q9Y3Q4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
HCN4Q9Y3Q4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.11■□□□□ 0.65
HCN4Q9Y3Q4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.11■□□□□ 0.65
HCN4Q9Y3Q4 FAM215A-202ENST00000632077 792 ntBASIC19.11■□□□□ 0.65
HCN4Q9Y3Q4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.11■□□□□ 0.65
HCN4Q9Y3Q4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.11■□□□□ 0.65
HCN4Q9Y3Q4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HCN4Q9Y3Q4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.11■□□□□ 0.65
HCN4Q9Y3Q4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HCN4Q9Y3Q4 Z83836.1-201ENST00000624605 1642 ntBASIC19.11■□□□□ 0.65
HCN4Q9Y3Q4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 AC092474.2-201ENST00000424288 719 ntBASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 SEC1P-202ENST00000473944 940 ntBASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 MIR1199-201ENST00000621445 119 ntBASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
HCN4Q9Y3Q4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 SNHG9-202ENST00000564014 471 ntBASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HCN4Q9Y3Q4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HCN4Q9Y3Q4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.08■□□□□ 0.65
HCN4Q9Y3Q4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HCN4Q9Y3Q4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
HCN4Q9Y3Q4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.08■□□□□ 0.65
HCN4Q9Y3Q4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
HCN4Q9Y3Q4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
HCN4Q9Y3Q4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HCN4Q9Y3Q4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms