Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC13.03□□□□□ -0.32
UBE2D4Q9Y2X8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
UBE2D4Q9Y2X8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
UBE2D4Q9Y2X8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.02□□□□□ -0.32
UBE2D4Q9Y2X8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
UBE2D4Q9Y2X8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
UBE2D4Q9Y2X8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
UBE2D4Q9Y2X8 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UBE2D4Q9Y2X8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
UBE2D4Q9Y2X8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UBE2D4Q9Y2X8 GNAS-203ENST00000306120 1878 ntBASIC13.02□□□□□ -0.32
UBE2D4Q9Y2X8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UBE2D4Q9Y2X8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.32
UBE2D4Q9Y2X8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.32
UBE2D4Q9Y2X8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.02□□□□□ -0.32
UBE2D4Q9Y2X8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 AC008687.6-201ENST00000596318 630 ntBASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.02□□□□□ -0.33
UBE2D4Q9Y2X8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 SLC29A4P1-201ENST00000398760 971 ntBASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 CROCCP5-201ENST00000436658 830 ntBASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 AC083906.2-201ENST00000511578 360 ntBASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 SOX15-203ENST00000570788 1093 ntBASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 MIR4758-201ENST00000577688 71 ntBASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 MYC-209ENST00000641252 345 ntBASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2D4Q9Y2X8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms