Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 BX323043.1-201ENST00000641006 1765 ntBASIC20.08■□□□□ 0.8
SSX2IPQ9Y2D8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
SSX2IPQ9Y2D8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
SSX2IPQ9Y2D8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SSX2IPQ9Y2D8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
SSX2IPQ9Y2D8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 SDHAP1-207ENST00000440850 2000 ntBASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 DUSP5P1-201ENST00000441325 1139 ntBASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 AL691432.3-201ENST00000621860 400 ntBASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSX2IPQ9Y2D8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSX2IPQ9Y2D8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSX2IPQ9Y2D8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSX2IPQ9Y2D8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SSX2IPQ9Y2D8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
SSX2IPQ9Y2D8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSX2IPQ9Y2D8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
SSX2IPQ9Y2D8 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.06■□□□□ 0.8
SSX2IPQ9Y2D8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.06■□□□□ 0.8
SSX2IPQ9Y2D8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.06■□□□□ 0.8
SSX2IPQ9Y2D8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.06■□□□□ 0.8
SSX2IPQ9Y2D8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSX2IPQ9Y2D8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SSX2IPQ9Y2D8 CLEC4GP1-201ENST00000596555 870 ntBASIC20.06■□□□□ 0.8
SSX2IPQ9Y2D8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.06■□□□□ 0.8
SSX2IPQ9Y2D8 AC024243.1-201ENST00000609234 778 ntBASIC20.06■□□□□ 0.8
SSX2IPQ9Y2D8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSX2IPQ9Y2D8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SSX2IPQ9Y2D8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSX2IPQ9Y2D8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SSX2IPQ9Y2D8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.06■□□□□ 0.8
SSX2IPQ9Y2D8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSX2IPQ9Y2D8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
SSX2IPQ9Y2D8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.06■□□□□ 0.8
SSX2IPQ9Y2D8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.06■□□□□ 0.8
SSX2IPQ9Y2D8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SSX2IPQ9Y2D8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.05■□□□□ 0.8
SSX2IPQ9Y2D8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSX2IPQ9Y2D8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSX2IPQ9Y2D8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
SSX2IPQ9Y2D8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.05■□□□□ 0.8
SSX2IPQ9Y2D8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.05■□□□□ 0.8
SSX2IPQ9Y2D8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSX2IPQ9Y2D8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SSX2IPQ9Y2D8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
SSX2IPQ9Y2D8 TPM4P1-201ENST00000436100 807 ntBASIC20.05■□□□□ 0.8
SSX2IPQ9Y2D8 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.05■□□□□ 0.8
SSX2IPQ9Y2D8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.05■□□□□ 0.8
SSX2IPQ9Y2D8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.05■□□□□ 0.8
SSX2IPQ9Y2D8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.05■□□□□ 0.8
SSX2IPQ9Y2D8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSX2IPQ9Y2D8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SSX2IPQ9Y2D8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.05■□□□□ 0.8
SSX2IPQ9Y2D8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SSX2IPQ9Y2D8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SSX2IPQ9Y2D8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSX2IPQ9Y2D8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.05■□□□□ 0.8
SSX2IPQ9Y2D8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSX2IPQ9Y2D8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SSX2IPQ9Y2D8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.04■□□□□ 0.8
SSX2IPQ9Y2D8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SSX2IPQ9Y2D8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SSX2IPQ9Y2D8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.04■□□□□ 0.8
SSX2IPQ9Y2D8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSX2IPQ9Y2D8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSX2IPQ9Y2D8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SSX2IPQ9Y2D8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSX2IPQ9Y2D8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSX2IPQ9Y2D8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSX2IPQ9Y2D8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.04■□□□□ 0.8
SSX2IPQ9Y2D8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.04■□□□□ 0.8
SSX2IPQ9Y2D8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSX2IPQ9Y2D8 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSX2IPQ9Y2D8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SSX2IPQ9Y2D8 AC036111.1-201ENST00000533973 1582 ntBASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms