Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 AL512604.3-201ENST00000569583 964 ntBASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 AC012306.2-201ENST00000609350 630 ntBASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGC3Q9UN70 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGC3Q9UN70 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.68■□□□□ 0.74
PCDHGC3Q9UN70 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGC3Q9UN70 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGC3Q9UN70 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGC3Q9UN70 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.68■□□□□ 0.74
PCDHGC3Q9UN70 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGC3Q9UN70 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGC3Q9UN70 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.68■□□□□ 0.74
PCDHGC3Q9UN70 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
PCDHGC3Q9UN70 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGC3Q9UN70 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGC3Q9UN70 AC104581.1-202ENST00000635932 2618 ntBASIC19.68■□□□□ 0.74
PCDHGC3Q9UN70 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGC3Q9UN70 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGC3Q9UN70 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PCDHGC3Q9UN70 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGC3Q9UN70 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 KRT18P23-201ENST00000435622 1283 ntBASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 AC097493.4-201ENST00000641197 219 ntBASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHGC3Q9UN70 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms