Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.97■□□□□ 0.79
SIX4Q9UIU6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIX4Q9UIU6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIX4Q9UIU6 STARP1-201ENST00000397973 869 ntBASIC19.97■□□□□ 0.79
SIX4Q9UIU6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.97■□□□□ 0.79
SIX4Q9UIU6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.97■□□□□ 0.79
SIX4Q9UIU6 KRT18P35-201ENST00000510488 1269 ntBASIC19.97■□□□□ 0.79
SIX4Q9UIU6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SIX4Q9UIU6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.97■□□□□ 0.79
SIX4Q9UIU6 AL445228.2-201ENST00000605589 952 ntBASIC19.97■□□□□ 0.79
SIX4Q9UIU6 AL590326.2-201ENST00000625139 305 ntBASIC19.97■□□□□ 0.79
SIX4Q9UIU6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.97■□□□□ 0.79
SIX4Q9UIU6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
SIX4Q9UIU6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SIX4Q9UIU6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIX4Q9UIU6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SIX4Q9UIU6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
SIX4Q9UIU6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIX4Q9UIU6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIX4Q9UIU6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SIX4Q9UIU6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SIX4Q9UIU6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIX4Q9UIU6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIX4Q9UIU6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIX4Q9UIU6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SIX4Q9UIU6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.96■□□□□ 0.79
SIX4Q9UIU6 HOMER2P1-201ENST00000455653 964 ntBASIC19.96■□□□□ 0.79
SIX4Q9UIU6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.96■□□□□ 0.79
SIX4Q9UIU6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.96■□□□□ 0.79
SIX4Q9UIU6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SIX4Q9UIU6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.96■□□□□ 0.79
SIX4Q9UIU6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.96■□□□□ 0.79
SIX4Q9UIU6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.96■□□□□ 0.79
SIX4Q9UIU6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SIX4Q9UIU6 AC010240.3-201ENST00000607688 395 ntBASIC19.96■□□□□ 0.79
SIX4Q9UIU6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SIX4Q9UIU6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.96■□□□□ 0.79
SIX4Q9UIU6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
SIX4Q9UIU6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIX4Q9UIU6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIX4Q9UIU6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.96■□□□□ 0.79
SIX4Q9UIU6 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SIX4Q9UIU6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIX4Q9UIU6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.96■□□□□ 0.79
SIX4Q9UIU6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.79
SIX4Q9UIU6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SIX4Q9UIU6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SIX4Q9UIU6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIX4Q9UIU6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIX4Q9UIU6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.95■□□□□ 0.78
SIX4Q9UIU6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.95■□□□□ 0.78
SIX4Q9UIU6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.95■□□□□ 0.78
SIX4Q9UIU6 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.95■□□□□ 0.78
SIX4Q9UIU6 AC092647.4-201ENST00000457211 535 ntBASIC19.95■□□□□ 0.78
SIX4Q9UIU6 RASA4DP-201ENST00000460726 1199 ntBASIC19.95■□□□□ 0.78
SIX4Q9UIU6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SIX4Q9UIU6 MIR3917-201ENST00000580971 93 ntBASIC19.95■□□□□ 0.78
SIX4Q9UIU6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.95■□□□□ 0.78
SIX4Q9UIU6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIX4Q9UIU6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
SIX4Q9UIU6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SIX4Q9UIU6 HYMAI.1-201ENST00000620949 238 ntBASIC19.95■□□□□ 0.78
SIX4Q9UIU6 AL157888.1-201ENST00000631930 593 ntBASIC19.95■□□□□ 0.78
SIX4Q9UIU6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SIX4Q9UIU6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SIX4Q9UIU6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.95■□□□□ 0.78
SIX4Q9UIU6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIX4Q9UIU6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SIX4Q9UIU6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIX4Q9UIU6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIX4Q9UIU6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SIX4Q9UIU6 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SIX4Q9UIU6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SIX4Q9UIU6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.94■□□□□ 0.78
SIX4Q9UIU6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIX4Q9UIU6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
SIX4Q9UIU6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIX4Q9UIU6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIX4Q9UIU6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SIX4Q9UIU6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.94■□□□□ 0.78
SIX4Q9UIU6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SIX4Q9UIU6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SIX4Q9UIU6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SIX4Q9UIU6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.94■□□□□ 0.78
SIX4Q9UIU6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.94■□□□□ 0.78
SIX4Q9UIU6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.94■□□□□ 0.78
SIX4Q9UIU6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.94■□□□□ 0.78
SIX4Q9UIU6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.94■□□□□ 0.78
SIX4Q9UIU6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
SIX4Q9UIU6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
SIX4Q9UIU6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.94■□□□□ 0.78
SIX4Q9UIU6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SIX4Q9UIU6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SIX4Q9UIU6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIX4Q9UIU6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SIX4Q9UIU6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SIX4Q9UIU6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SIX4Q9UIU6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.93■□□□□ 0.78
SIX4Q9UIU6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIX4Q9UIU6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms