Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 RPPH1-201ENST00000516869 333 ntBASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
LRTM1Q9HBL6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 AC008040.2-201ENST00000461049 708 ntBASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 CKBP1-201ENST00000565489 1086 ntBASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 AF186192.3-201ENST00000583427 947 ntBASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 AC073195.1-201ENST00000607241 877 ntBASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 MYC-208ENST00000641036 567 ntBASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 ABALON-201ENST00000629058 1903 ntBASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 AL357033.4-201ENST00000617703 1807 ntBASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRTM1Q9HBL6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 FAM207BP-201ENST00000447172 505 ntBASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 RARRES2P10-201ENST00000564312 460 ntBASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 AC112777.1-201ENST00000540175 1423 ntBASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRTM1Q9HBL6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 AL162741.1-201ENST00000565563 1558 ntBASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRTM1Q9HBL6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms