Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A1Q9H2H9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 MFAP1P1-201ENST00000442257 1255 ntBASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 SLC25A1P4-201ENST00000567977 778 ntBASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 AP001412.1-201ENST00000608405 714 ntBASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 AL109659.2-201ENST00000606809 1674 ntBASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A1Q9H2H9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 AC112777.1-201ENST00000540175 1423 ntBASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 REXO1L10P-201ENST00000615707 1290 ntBASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 REXO1L12P-201ENST00000622156 912 ntBASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 AC026471.1-201ENST00000564629 3026 ntBASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 AC008556.1-201ENST00000610908 2040 ntBASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC38A1Q9H2H9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 AC097488.1-201ENST00000507834 756 ntBASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 Z99916.2-201ENST00000604037 246 ntBASIC17.29■□□□□ 0.36
SLC38A1Q9H2H9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms