Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.52■□□□□ 0.24
COMMD4Q9H0A8 PCDHB18P-201ENST00000524813 2368 ntBASIC16.52■□□□□ 0.24
COMMD4Q9H0A8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
COMMD4Q9H0A8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.52■□□□□ 0.24
COMMD4Q9H0A8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.52■□□□□ 0.24
COMMD4Q9H0A8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
COMMD4Q9H0A8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COMMD4Q9H0A8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COMMD4Q9H0A8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
COMMD4Q9H0A8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COMMD4Q9H0A8 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COMMD4Q9H0A8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
COMMD4Q9H0A8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
COMMD4Q9H0A8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.52■□□□□ 0.24
COMMD4Q9H0A8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COMMD4Q9H0A8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.52■□□□□ 0.24
COMMD4Q9H0A8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.52■□□□□ 0.24
COMMD4Q9H0A8 AC004264.1-201ENST00000608354 794 ntBASIC16.52■□□□□ 0.24
COMMD4Q9H0A8 MYC-208ENST00000641036 567 ntBASIC16.52■□□□□ 0.24
COMMD4Q9H0A8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
COMMD4Q9H0A8 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.52■□□□□ 0.23
COMMD4Q9H0A8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
COMMD4Q9H0A8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
COMMD4Q9H0A8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COMMD4Q9H0A8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COMMD4Q9H0A8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COMMD4Q9H0A8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COMMD4Q9H0A8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 AC092666.2-201ENST00000613287 246 ntBASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 HLA-A-209ENST00000638375 975 ntBASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COMMD4Q9H0A8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 AC068880.1-201ENST00000507289 2297 ntBASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 C1QL1P1-201ENST00000568105 661 ntBASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COMMD4Q9H0A8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD4Q9H0A8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD4Q9H0A8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD4Q9H0A8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
COMMD4Q9H0A8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD4Q9H0A8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.49■□□□□ 0.23
COMMD4Q9H0A8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COMMD4Q9H0A8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.49■□□□□ 0.23
COMMD4Q9H0A8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
COMMD4Q9H0A8 NBPF21P-201ENST00000425093 1451 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms