Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.21■□□□□ 0.35
TRIM2Q9C040 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM2Q9C040 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM2Q9C040 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.21■□□□□ 0.35
TRIM2Q9C040 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM2Q9C040 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM2Q9C040 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM2Q9C040 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM2Q9C040 AC068587.9-201ENST00000641814 219 ntBASIC17.21■□□□□ 0.35
TRIM2Q9C040 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM2Q9C040 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRIM2Q9C040 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRIM2Q9C040 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM2Q9C040 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM2Q9C040 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRIM2Q9C040 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.21■□□□□ 0.35
TRIM2Q9C040 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.21■□□□□ 0.34
TRIM2Q9C040 AC005082.1-201ENST00000413042 2259 ntBASIC17.21■□□□□ 0.34
TRIM2Q9C040 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.21■□□□□ 0.34
TRIM2Q9C040 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM2Q9C040 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM2Q9C040 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
TRIM2Q9C040 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM2Q9C040 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM2Q9C040 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM2Q9C040 B3GAT3P1-201ENST00000471720 806 ntBASIC17.2■□□□□ 0.34
TRIM2Q9C040 AC011506.1-201ENST00000474329 610 ntBASIC17.2■□□□□ 0.34
TRIM2Q9C040 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM2Q9C040 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM2Q9C040 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.2■□□□□ 0.34
TRIM2Q9C040 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM2Q9C040 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM2Q9C040 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM2Q9C040 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM2Q9C040 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM2Q9C040 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM2Q9C040 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM2Q9C040 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM2Q9C040 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM2Q9C040 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM2Q9C040 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM2Q9C040 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM2Q9C040 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM2Q9C040 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.19■□□□□ 0.34
TRIM2Q9C040 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.19■□□□□ 0.34
TRIM2Q9C040 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM2Q9C040 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM2Q9C040 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM2Q9C040 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM2Q9C040 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.19■□□□□ 0.34
TRIM2Q9C040 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM2Q9C040 TSPY7P-201ENST00000431358 1114 ntBASIC17.19■□□□□ 0.34
TRIM2Q9C040 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM2Q9C040 AC008040.2-201ENST00000461049 708 ntBASIC17.19■□□□□ 0.34
TRIM2Q9C040 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM2Q9C040 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM2Q9C040 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM2Q9C040 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM2Q9C040 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.19■□□□□ 0.34
TRIM2Q9C040 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM2Q9C040 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM2Q9C040 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM2Q9C040 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM2Q9C040 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM2Q9C040 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM2Q9C040 AC009113.1-201ENST00000570267 2443 ntBASIC17.19■□□□□ 0.34
TRIM2Q9C040 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM2Q9C040 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM2Q9C040 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM2Q9C040 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM2Q9C040 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM2Q9C040 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRIM2Q9C040 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM2Q9C040 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM2Q9C040 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM2Q9C040 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM2Q9C040 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRIM2Q9C040 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRIM2Q9C040 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM2Q9C040 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM2Q9C040 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
TRIM2Q9C040 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRIM2Q9C040 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM2Q9C040 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM2Q9C040 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.18■□□□□ 0.34
TRIM2Q9C040 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM2Q9C040 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TRIM2Q9C040 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM2Q9C040 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM2Q9C040 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM2Q9C040 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM2Q9C040 AC073912.3-201ENST00000624414 853 ntBASIC17.18■□□□□ 0.34
TRIM2Q9C040 MYC-208ENST00000641036 567 ntBASIC17.18■□□□□ 0.34
TRIM2Q9C040 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
TRIM2Q9C040 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM2Q9C040 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM2Q9C040 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM2Q9C040 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM2Q9C040 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM2Q9C040 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms