Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 AC135279.3-201ENST00000610945 1311 ntBASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 GUSBP5-201ENST00000418136 578 ntBASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 AC120057.1-201ENST00000483947 663 ntBASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 AC024257.2-201ENST00000549699 147 ntBASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 AC126763.1-201ENST00000552015 2118 ntBASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 AC104187.1-201ENST00000607510 612 ntBASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 AL136162.1-201ENST00000607711 1078 ntBASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 CYP21A1P-202ENST00000354927 1481 ntBASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
LCE3DQ9BYE3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms