Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCM2Q9BSQ5 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCM2Q9BSQ5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
CCM2Q9BSQ5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCM2Q9BSQ5 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 RCN1P1-201ENST00000400413 996 ntBASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 FAM210CP-201ENST00000445714 574 ntBASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 AL031598.1-201ENST00000561511 1773 ntBASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 Z98044.1-201ENST00000632503 1764 ntBASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 AC141257.4-201ENST00000634557 245 ntBASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 AC136944.6-201ENST00000634818 245 ntBASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCM2Q9BSQ5 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.35■□□□□ 0.53
CCM2Q9BSQ5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2Q9BSQ5 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2Q9BSQ5 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCM2Q9BSQ5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2Q9BSQ5 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2Q9BSQ5 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.35■□□□□ 0.53
CCM2Q9BSQ5 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2Q9BSQ5 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2Q9BSQ5 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2Q9BSQ5 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CCM2Q9BSQ5 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.35■□□□□ 0.53
CCM2Q9BSQ5 AP000523.1-201ENST00000398242 1049 ntBASIC18.35■□□□□ 0.53
CCM2Q9BSQ5 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2Q9BSQ5 BX664615.1-201ENST00000443558 458 ntBASIC18.35■□□□□ 0.53
CCM2Q9BSQ5 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CCM2Q9BSQ5 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCM2Q9BSQ5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2Q9BSQ5 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.35■□□□□ 0.53
CCM2Q9BSQ5 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2Q9BSQ5 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.35■□□□□ 0.53
CCM2Q9BSQ5 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2Q9BSQ5 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCM2Q9BSQ5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.34■□□□□ 0.53
CCM2Q9BSQ5 AC034236.2-201ENST00000606662 1610 ntBASIC18.34■□□□□ 0.53
CCM2Q9BSQ5 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCM2Q9BSQ5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCM2Q9BSQ5 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCM2Q9BSQ5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCM2Q9BSQ5 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CCM2Q9BSQ5 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCM2Q9BSQ5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.34■□□□□ 0.53
CCM2Q9BSQ5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.34■□□□□ 0.53
CCM2Q9BSQ5 AC009947.2-201ENST00000444014 672 ntBASIC18.34■□□□□ 0.53
CCM2Q9BSQ5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.34■□□□□ 0.53
CCM2Q9BSQ5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.34■□□□□ 0.53
CCM2Q9BSQ5 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.34■□□□□ 0.53
CCM2Q9BSQ5 NEK4P2-201ENST00000580004 1012 ntBASIC18.34■□□□□ 0.53
CCM2Q9BSQ5 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CCM2Q9BSQ5 AL031432.5-201ENST00000641059 760 ntBASIC18.34■□□□□ 0.53
CCM2Q9BSQ5 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.34■□□□□ 0.53
CCM2Q9BSQ5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.34■□□□□ 0.53
CCM2Q9BSQ5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCM2Q9BSQ5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.34■□□□□ 0.53
CCM2Q9BSQ5 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCM2Q9BSQ5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCM2Q9BSQ5 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCM2Q9BSQ5 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.33■□□□□ 0.53
CCM2Q9BSQ5 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCM2Q9BSQ5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CCM2Q9BSQ5 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CCM2Q9BSQ5 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCM2Q9BSQ5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCM2Q9BSQ5 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CCM2Q9BSQ5 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCM2Q9BSQ5 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCM2Q9BSQ5 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
CCM2Q9BSQ5 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.33■□□□□ 0.52
CCM2Q9BSQ5 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.33■□□□□ 0.52
CCM2Q9BSQ5 ANO7L1-203ENST00000602586 1720 ntBASIC18.33■□□□□ 0.52
CCM2Q9BSQ5 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CCM2Q9BSQ5 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2Q9BSQ5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCM2Q9BSQ5 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.33■□□□□ 0.52
CCM2Q9BSQ5 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
CCM2Q9BSQ5 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.33■□□□□ 0.52
CCM2Q9BSQ5 KRT18P21-201ENST00000515767 1272 ntBASIC18.33■□□□□ 0.52
CCM2Q9BSQ5 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
CCM2Q9BSQ5 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.33■□□□□ 0.52
CCM2Q9BSQ5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms