Protein–RNA interactions for Protein: Q9BQ50

TREX2, Three prime repair exonuclease 2, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2Q9BQ50 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 KRT8P11-201ENST00000409686 1436 ntBASIC17.56■□□□□ 0.4
TREX2Q9BQ50 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 FAM197Y1-201ENST00000421178 764 ntBASIC17.56■□□□□ 0.4
TREX2Q9BQ50 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 NUDT16P1-203ENST00000513809 620 ntBASIC17.56■□□□□ 0.4
TREX2Q9BQ50 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 AC026471.1-201ENST00000564629 3026 ntBASIC17.56■□□□□ 0.4
TREX2Q9BQ50 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 AC079598.2-202ENST00000546624 1451 ntBASIC17.56■□□□□ 0.4
TREX2Q9BQ50 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TREX2Q9BQ50 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 RCC2P6-201ENST00000526625 1557 ntBASIC17.55■□□□□ 0.4
TREX2Q9BQ50 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 AC113347.1-201ENST00000413321 391 ntBASIC17.55■□□□□ 0.4
TREX2Q9BQ50 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 AC004980.1-204ENST00000429707 299 ntBASIC17.55■□□□□ 0.4
TREX2Q9BQ50 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 HEIH-201ENST00000623091 1652 ntBASIC17.55■□□□□ 0.4
TREX2Q9BQ50 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TREX2Q9BQ50 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TREX2Q9BQ50 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TREX2Q9BQ50 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.54■□□□□ 0.4
TREX2Q9BQ50 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.54■□□□□ 0.4
TREX2Q9BQ50 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.54■□□□□ 0.4
TREX2Q9BQ50 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TREX2Q9BQ50 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.54■□□□□ 0.4
TREX2Q9BQ50 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TREX2Q9BQ50 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TREX2Q9BQ50 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TREX2Q9BQ50 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TREX2Q9BQ50 AC005521.1-201ENST00000393351 872 ntBASIC17.54■□□□□ 0.4
TREX2Q9BQ50 AP002982.1-201ENST00000492365 877 ntBASIC17.54■□□□□ 0.4
TREX2Q9BQ50 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.54■□□□□ 0.4
TREX2Q9BQ50 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TREX2Q9BQ50 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.54■□□□□ 0.4
TREX2Q9BQ50 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.54■□□□□ 0.4
TREX2Q9BQ50 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.54■□□□□ 0.4
TREX2Q9BQ50 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.54■□□□□ 0.4
TREX2Q9BQ50 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TREX2Q9BQ50 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.54■□□□□ 0.4
TREX2Q9BQ50 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.54■□□□□ 0.4
TREX2Q9BQ50 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.54■□□□□ 0.4
TREX2Q9BQ50 KRT8P9-201ENST00000558927 1449 ntBASIC17.54■□□□□ 0.4
TREX2Q9BQ50 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TREX2Q9BQ50 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TREX2Q9BQ50 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TREX2Q9BQ50 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TREX2Q9BQ50 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TREX2Q9BQ50 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TREX2Q9BQ50 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms