Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC38A3Q99624 HBZP1-201ENST00000354915 429 ntBASIC18.1■□□□□ 0.49
SLC38A3Q99624 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC38A3Q99624 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC38A3Q99624 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.1■□□□□ 0.49
SLC38A3Q99624 AC092597.1-201ENST00000487352 616 ntBASIC18.1■□□□□ 0.49
SLC38A3Q99624 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC38A3Q99624 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.1■□□□□ 0.49
SLC38A3Q99624 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC38A3Q99624 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
SLC38A3Q99624 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.1■□□□□ 0.49
SLC38A3Q99624 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC38A3Q99624 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SLC38A3Q99624 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SLC38A3Q99624 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC38A3Q99624 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC38A3Q99624 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC38A3Q99624 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC38A3Q99624 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SLC38A3Q99624 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC38A3Q99624 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A3Q99624 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC38A3Q99624 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A3Q99624 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A3Q99624 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A3Q99624 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A3Q99624 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC38A3Q99624 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A3Q99624 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A3Q99624 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A3Q99624 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A3Q99624 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A3Q99624 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC38A3Q99624 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A3Q99624 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A3Q99624 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
SLC38A3Q99624 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC38A3Q99624 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A3Q99624 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC38A3Q99624 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC38A3Q99624 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A3Q99624 AC069148.1-201ENST00000608741 768 ntBASIC18.09■□□□□ 0.49
SLC38A3Q99624 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC38A3Q99624 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SLC38A3Q99624 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A3Q99624 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A3Q99624 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A3Q99624 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
SLC38A3Q99624 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SLC38A3Q99624 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A3Q99624 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SLC38A3Q99624 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A3Q99624 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A3Q99624 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A3Q99624 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A3Q99624 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SLC38A3Q99624 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC38A3Q99624 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
SLC38A3Q99624 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.08■□□□□ 0.49
SLC38A3Q99624 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC38A3Q99624 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SLC38A3Q99624 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC38A3Q99624 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC38A3Q99624 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC38A3Q99624 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.08■□□□□ 0.48
SLC38A3Q99624 MIR564-202ENST00000385049 94 ntBASIC18.08■□□□□ 0.48
SLC38A3Q99624 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC38A3Q99624 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC38A3Q99624 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.08■□□□□ 0.48
SLC38A3Q99624 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC38A3Q99624 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC38A3Q99624 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC38A3Q99624 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
SLC38A3Q99624 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SLC38A3Q99624 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SLC38A3Q99624 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC38A3Q99624 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC38A3Q99624 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SLC38A3Q99624 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A3Q99624 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SLC38A3Q99624 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC38A3Q99624 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A3Q99624 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A3Q99624 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
SLC38A3Q99624 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A3Q99624 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC38A3Q99624 AL645929.1-201ENST00000420084 975 ntBASIC18.07■□□□□ 0.48
SLC38A3Q99624 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A3Q99624 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC38A3Q99624 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.07■□□□□ 0.48
SLC38A3Q99624 MIR3917-201ENST00000580971 93 ntBASIC18.07■□□□□ 0.48
SLC38A3Q99624 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A3Q99624 AL157888.1-201ENST00000631930 593 ntBASIC18.07■□□□□ 0.48
SLC38A3Q99624 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC38A3Q99624 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC38A3Q99624 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SLC38A3Q99624 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A3Q99624 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC38A3Q99624 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A3Q99624 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms