Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC22.12■■□□□ 1.13
NEK1Q96PY6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NEK1Q96PY6 AC073592.3-201ENST00000625118 1834 ntBASIC22.12■■□□□ 1.13
NEK1Q96PY6 KRT8P9-201ENST00000558927 1449 ntBASIC22.12■■□□□ 1.13
NEK1Q96PY6 AC092338.2-201ENST00000568827 1415 ntBASIC22.12■■□□□ 1.13
NEK1Q96PY6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC22.12■■□□□ 1.13
NEK1Q96PY6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC22.11■■□□□ 1.13
NEK1Q96PY6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NEK1Q96PY6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NEK1Q96PY6 CYP2D8P-201ENST00000433633 1490 ntBASIC22.11■■□□□ 1.13
NEK1Q96PY6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC22.11■■□□□ 1.13
NEK1Q96PY6 CCR12P-201ENST00000446203 998 ntBASIC22.11■■□□□ 1.13
NEK1Q96PY6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NEK1Q96PY6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22.11■■□□□ 1.13
NEK1Q96PY6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NEK1Q96PY6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
NEK1Q96PY6 AC112777.1-201ENST00000540175 1423 ntBASIC22.11■■□□□ 1.13
NEK1Q96PY6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NEK1Q96PY6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
NEK1Q96PY6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
NEK1Q96PY6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC22.11■■□□□ 1.13
NEK1Q96PY6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
NEK1Q96PY6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
NEK1Q96PY6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NEK1Q96PY6 TSPY14P-201ENST00000303979 915 ntBASIC22.1■■□□□ 1.13
NEK1Q96PY6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NEK1Q96PY6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NEK1Q96PY6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
NEK1Q96PY6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NEK1Q96PY6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC22.1■■□□□ 1.13
NEK1Q96PY6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NEK1Q96PY6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC22.1■■□□□ 1.13
NEK1Q96PY6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC22.1■■□□□ 1.13
NEK1Q96PY6 C2orf69P3-201ENST00000565542 1120 ntBASIC22.1■■□□□ 1.13
NEK1Q96PY6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
NEK1Q96PY6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC22.1■■□□□ 1.13
NEK1Q96PY6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
NEK1Q96PY6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NEK1Q96PY6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
NEK1Q96PY6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC22.1■■□□□ 1.13
NEK1Q96PY6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
NEK1Q96PY6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
NEK1Q96PY6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
NEK1Q96PY6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NEK1Q96PY6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NEK1Q96PY6 MMP23A-201ENST00000234610 1017 ntBASIC22.09■■□□□ 1.13
NEK1Q96PY6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NEK1Q96PY6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC22.09■■□□□ 1.13
NEK1Q96PY6 AC007663.1-201ENST00000438948 1240 ntBASIC22.09■■□□□ 1.13
NEK1Q96PY6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NEK1Q96PY6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NEK1Q96PY6 MIR3180-5-201ENST00000583743 153 ntBASIC22.09■■□□□ 1.13
NEK1Q96PY6 MYC-208ENST00000641036 567 ntBASIC22.09■■□□□ 1.13
NEK1Q96PY6 AC116562.4-202ENST00000641738 218 ntBASIC22.09■■□□□ 1.13
NEK1Q96PY6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NEK1Q96PY6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
NEK1Q96PY6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NEK1Q96PY6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NEK1Q96PY6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NEK1Q96PY6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NEK1Q96PY6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NEK1Q96PY6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC22.09■■□□□ 1.13
NEK1Q96PY6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC22.08■■□□□ 1.13
NEK1Q96PY6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
NEK1Q96PY6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
NEK1Q96PY6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
NEK1Q96PY6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
NEK1Q96PY6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC22.08■■□□□ 1.13
NEK1Q96PY6 KRT18P41-201ENST00000518924 1277 ntBASIC22.08■■□□□ 1.13
NEK1Q96PY6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.08■■□□□ 1.13
NEK1Q96PY6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
NEK1Q96PY6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC22.08■■□□□ 1.13
NEK1Q96PY6 EGLN1P1-201ENST00000531623 762 ntBASIC22.08■■□□□ 1.13
NEK1Q96PY6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.08■■□□□ 1.13
NEK1Q96PY6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC22.08■■□□□ 1.13
NEK1Q96PY6 AC010947.1-201ENST00000623454 693 ntBASIC22.08■■□□□ 1.13
NEK1Q96PY6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
NEK1Q96PY6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
NEK1Q96PY6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
NEK1Q96PY6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC22.08■■□□□ 1.12
NEK1Q96PY6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC22.08■■□□□ 1.12
NEK1Q96PY6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC22.08■■□□□ 1.12
NEK1Q96PY6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NEK1Q96PY6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
NEK1Q96PY6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC22.07■■□□□ 1.12
NEK1Q96PY6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
NEK1Q96PY6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NEK1Q96PY6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC22.07■■□□□ 1.12
NEK1Q96PY6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
NEK1Q96PY6 INGX-201ENST00000359239 846 ntBASIC22.07■■□□□ 1.12
NEK1Q96PY6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC22.07■■□□□ 1.12
NEK1Q96PY6 BX088651.1-201ENST00000540551 451 ntBASIC22.07■■□□□ 1.12
NEK1Q96PY6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC22.07■■□□□ 1.12
NEK1Q96PY6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
NEK1Q96PY6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC22.07■■□□□ 1.12
NEK1Q96PY6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NEK1Q96PY6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
NEK1Q96PY6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NEK1Q96PY6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC22.07■■□□□ 1.12
NEK1Q96PY6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms