Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 AP000525.1-201ENST00000608286 694 ntBASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 KRT8P45-201ENST00000414328 1447 ntBASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 AC112777.1-201ENST00000540175 1423 ntBASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 AC104581.1-202ENST00000635932 2618 ntBASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MS4A4EQ96PG1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 SLC25A1P2-201ENST00000430693 912 ntBASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 AC126763.1-201ENST00000552015 2118 ntBASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 HCG11-201ENST00000411553 5696 ntBASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MS4A4EQ96PG1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 AL499627.1-201ENST00000569373 2188 ntBASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 FITM1-202ENST00000559294 800 ntBASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 AC079598.2-202ENST00000546624 1451 ntBASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.42■□□□□ 0.38
MS4A4EQ96PG1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.41■□□□□ 0.38
MS4A4EQ96PG1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.41■□□□□ 0.38
MS4A4EQ96PG1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.41■□□□□ 0.38
MS4A4EQ96PG1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MS4A4EQ96PG1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
MS4A4EQ96PG1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.41■□□□□ 0.38
MS4A4EQ96PG1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MS4A4EQ96PG1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MS4A4EQ96PG1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.41■□□□□ 0.38
MS4A4EQ96PG1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
MS4A4EQ96PG1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MS4A4EQ96PG1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
MS4A4EQ96PG1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MS4A4EQ96PG1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MS4A4EQ96PG1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MS4A4EQ96PG1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MS4A4EQ96PG1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MS4A4EQ96PG1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
MS4A4EQ96PG1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.41■□□□□ 0.38
MS4A4EQ96PG1 AL355075.4-201ENST00000554988 638 ntBASIC17.41■□□□□ 0.38
MS4A4EQ96PG1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MS4A4EQ96PG1 MIR4497-201ENST00000583208 89 ntBASIC17.41■□□□□ 0.38
MS4A4EQ96PG1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms