Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 MYLKP1-201ENST00000509077 1580 ntBASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.68■□□□□ 0.74
VCPIP1Q96JH7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCPIP1Q96JH7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.67■□□□□ 0.74
VCPIP1Q96JH7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
VCPIP1Q96JH7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCPIP1Q96JH7 AL354751.1-201ENST00000412768 1863 ntBASIC19.67■□□□□ 0.74
VCPIP1Q96JH7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCPIP1Q96JH7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCPIP1Q96JH7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.67■□□□□ 0.74
VCPIP1Q96JH7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCPIP1Q96JH7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCPIP1Q96JH7 AC034236.2-201ENST00000606662 1610 ntBASIC19.67■□□□□ 0.74
VCPIP1Q96JH7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
VCPIP1Q96JH7 TSPY17P-201ENST00000450329 467 ntBASIC19.67■□□□□ 0.74
VCPIP1Q96JH7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.67■□□□□ 0.74
VCPIP1Q96JH7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.67■□□□□ 0.74
VCPIP1Q96JH7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCPIP1Q96JH7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VCPIP1Q96JH7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.67■□□□□ 0.74
VCPIP1Q96JH7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCPIP1Q96JH7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
VCPIP1Q96JH7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCPIP1Q96JH7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.67■□□□□ 0.74
VCPIP1Q96JH7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
VCPIP1Q96JH7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCPIP1Q96JH7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.66■□□□□ 0.74
VCPIP1Q96JH7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCPIP1Q96JH7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
VCPIP1Q96JH7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCPIP1Q96JH7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCPIP1Q96JH7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCPIP1Q96JH7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.66■□□□□ 0.74
VCPIP1Q96JH7 TSPY7P-201ENST00000431358 1114 ntBASIC19.66■□□□□ 0.74
VCPIP1Q96JH7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCPIP1Q96JH7 FITM1-202ENST00000559294 800 ntBASIC19.66■□□□□ 0.74
VCPIP1Q96JH7 AL353719.1-201ENST00000566847 864 ntBASIC19.66■□□□□ 0.74
VCPIP1Q96JH7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
VCPIP1Q96JH7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VCPIP1Q96JH7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCPIP1Q96JH7 KRT17P2-201ENST00000300992 1314 ntBASIC19.66■□□□□ 0.74
VCPIP1Q96JH7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
VCPIP1Q96JH7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VCPIP1Q96JH7 AL390961.4-201ENST00000623958 2535 ntBASIC19.66■□□□□ 0.74
VCPIP1Q96JH7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCPIP1Q96JH7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.66■□□□□ 0.74
VCPIP1Q96JH7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCPIP1Q96JH7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VCPIP1Q96JH7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 MIR3180-5-201ENST00000583743 153 ntBASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 LINC01023-201ENST00000606054 436 ntBASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.65■□□□□ 0.74
VCPIP1Q96JH7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.64■□□□□ 0.74
VCPIP1Q96JH7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.64■□□□□ 0.74
VCPIP1Q96JH7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VCPIP1Q96JH7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
VCPIP1Q96JH7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
VCPIP1Q96JH7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.64■□□□□ 0.74
VCPIP1Q96JH7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VCPIP1Q96JH7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VCPIP1Q96JH7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
VCPIP1Q96JH7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms