Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH3KBP1Q96B97 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 COX11P1-201ENST00000489116 835 ntBASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 KRT18P35-201ENST00000510488 1269 ntBASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 AC141257.4-201ENST00000634557 245 ntBASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 AC136944.6-201ENST00000634818 245 ntBASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SH3KBP1Q96B97 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH3KBP1Q96B97 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH3KBP1Q96B97 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH3KBP1Q96B97 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH3KBP1Q96B97 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH3KBP1Q96B97 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SH3KBP1Q96B97 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.48■□□□□ 0.55
SH3KBP1Q96B97 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH3KBP1Q96B97 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH3KBP1Q96B97 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH3KBP1Q96B97 TSPY23P-201ENST00000440136 739 ntBASIC18.48■□□□□ 0.55
SH3KBP1Q96B97 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH3KBP1Q96B97 AC006011.2-201ENST00000621313 1158 ntBASIC18.48■□□□□ 0.55
SH3KBP1Q96B97 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
SH3KBP1Q96B97 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SH3KBP1Q96B97 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH3KBP1Q96B97 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SH3KBP1Q96B97 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.48■□□□□ 0.55
SH3KBP1Q96B97 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SH3KBP1Q96B97 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH3KBP1Q96B97 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH3KBP1Q96B97 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH3KBP1Q96B97 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.47■□□□□ 0.55
SH3KBP1Q96B97 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SH3KBP1Q96B97 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH3KBP1Q96B97 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH3KBP1Q96B97 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
SH3KBP1Q96B97 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SH3KBP1Q96B97 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH3KBP1Q96B97 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
SH3KBP1Q96B97 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH3KBP1Q96B97 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SH3KBP1Q96B97 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH3KBP1Q96B97 AP000523.1-201ENST00000398242 1049 ntBASIC18.47■□□□□ 0.55
SH3KBP1Q96B97 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH3KBP1Q96B97 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.47■□□□□ 0.55
SH3KBP1Q96B97 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.47■□□□□ 0.55
SH3KBP1Q96B97 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.47■□□□□ 0.55
SH3KBP1Q96B97 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH3KBP1Q96B97 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SH3KBP1Q96B97 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH3KBP1Q96B97 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH3KBP1Q96B97 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH3KBP1Q96B97 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SH3KBP1Q96B97 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SH3KBP1Q96B97 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms