Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBE2E3Q969T4 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.98■□□□□ 0.47
UBE2E3Q969T4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2E3Q969T4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2E3Q969T4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2E3Q969T4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2E3Q969T4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2E3Q969T4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2E3Q969T4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.97■□□□□ 0.47
UBE2E3Q969T4 AC079598.2-202ENST00000546624 1451 ntBASIC17.97■□□□□ 0.47
UBE2E3Q969T4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.97■□□□□ 0.47
UBE2E3Q969T4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2E3Q969T4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2E3Q969T4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2E3Q969T4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2E3Q969T4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2E3Q969T4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2E3Q969T4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBE2E3Q969T4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBE2E3Q969T4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBE2E3Q969T4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBE2E3Q969T4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBE2E3Q969T4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.96■□□□□ 0.47
UBE2E3Q969T4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.96■□□□□ 0.47
UBE2E3Q969T4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.96■□□□□ 0.47
UBE2E3Q969T4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.96■□□□□ 0.47
UBE2E3Q969T4 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.96■□□□□ 0.47
UBE2E3Q969T4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBE2E3Q969T4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.96■□□□□ 0.47
UBE2E3Q969T4 AC116562.4-202ENST00000641738 218 ntBASIC17.96■□□□□ 0.47
UBE2E3Q969T4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UBE2E3Q969T4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBE2E3Q969T4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBE2E3Q969T4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBE2E3Q969T4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.96■□□□□ 0.47
UBE2E3Q969T4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBE2E3Q969T4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.96■□□□□ 0.47
UBE2E3Q969T4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
UBE2E3Q969T4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
UBE2E3Q969T4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
UBE2E3Q969T4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 MIR1238-201ENST00000408483 83 ntBASIC17.95■□□□□ 0.46
UBE2E3Q969T4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 AL355075.4-201ENST00000554988 638 ntBASIC17.95■□□□□ 0.46
UBE2E3Q969T4 AL353719.1-201ENST00000566847 864 ntBASIC17.95■□□□□ 0.46
UBE2E3Q969T4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 AL023803.3-201ENST00000615559 522 ntBASIC17.95■□□□□ 0.46
UBE2E3Q969T4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 GPAT2P1-201ENST00000444924 1672 ntBASIC17.95■□□□□ 0.46
UBE2E3Q969T4 KRT8P45-201ENST00000414328 1447 ntBASIC17.95■□□□□ 0.46
UBE2E3Q969T4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.95■□□□□ 0.46
UBE2E3Q969T4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 AC008556.1-201ENST00000610908 2040 ntBASIC17.94■□□□□ 0.46
UBE2E3Q969T4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.94■□□□□ 0.46
UBE2E3Q969T4 MIR564-202ENST00000385049 94 ntBASIC17.94■□□□□ 0.46
UBE2E3Q969T4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 KRT18P41-201ENST00000518924 1277 ntBASIC17.94■□□□□ 0.46
UBE2E3Q969T4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBE2E3Q969T4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms