Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC12.64□□□□□ -0.39
COPS9Q8WXC6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC12.64□□□□□ -0.39
COPS9Q8WXC6 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS9Q8WXC6 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS9Q8WXC6 CYP21A1P-202ENST00000354927 1481 ntBASIC12.64□□□□□ -0.39
COPS9Q8WXC6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS9Q8WXC6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS9Q8WXC6 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COPS9Q8WXC6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
COPS9Q8WXC6 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
COPS9Q8WXC6 AC134043.2-201ENST00000624206 2238 ntBASIC12.64□□□□□ -0.39
COPS9Q8WXC6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 AC012317.2-201ENST00000623305 2251 ntBASIC12.63□□□□□ -0.39
COPS9Q8WXC6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 CEP83-AS1-201ENST00000623122 2482 ntBASIC12.63□□□□□ -0.39
COPS9Q8WXC6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 AC023632.3-201ENST00000521633 145 ntBASIC12.63□□□□□ -0.39
COPS9Q8WXC6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 AC027682.1-201ENST00000562846 899 ntBASIC12.63□□□□□ -0.39
COPS9Q8WXC6 MFSD11-216ENST00000590393 1141 ntBASIC12.63□□□□□ -0.39
COPS9Q8WXC6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 TPRG1LP1-201ENST00000598702 760 ntBASIC12.63□□□□□ -0.39
COPS9Q8WXC6 AP001160.3-201ENST00000601484 763 ntBASIC12.63□□□□□ -0.39
COPS9Q8WXC6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 AC139713.2-201ENST00000641328 2723 ntBASIC12.63□□□□□ -0.39
COPS9Q8WXC6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COPS9Q8WXC6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 NORAD-201ENST00000565493 5339 ntBASIC12.62□□□□□ -0.39
COPS9Q8WXC6 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms