Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RDH11Q8TC12 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.4■□□□□ 0.54
RDH11Q8TC12 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RDH11Q8TC12 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RDH11Q8TC12 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.4■□□□□ 0.54
RDH11Q8TC12 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.4■□□□□ 0.54
RDH11Q8TC12 SLC25A6P5-201ENST00000435663 894 ntBASIC18.4■□□□□ 0.54
RDH11Q8TC12 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RDH11Q8TC12 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.4■□□□□ 0.54
RDH11Q8TC12 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.4■□□□□ 0.54
RDH11Q8TC12 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.4■□□□□ 0.54
RDH11Q8TC12 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RDH11Q8TC12 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.4■□□□□ 0.54
RDH11Q8TC12 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RDH11Q8TC12 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.4■□□□□ 0.54
RDH11Q8TC12 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.4■□□□□ 0.54
RDH11Q8TC12 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RDH11Q8TC12 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RDH11Q8TC12 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RDH11Q8TC12 AC138932.1-201ENST00000534164 6830 ntBASIC18.4■□□□□ 0.54
RDH11Q8TC12 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.4■□□□□ 0.54
RDH11Q8TC12 AC135776.1-201ENST00000319817 2481 ntBASIC18.4■□□□□ 0.54
RDH11Q8TC12 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.4■□□□□ 0.54
RDH11Q8TC12 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RDH11Q8TC12 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.4■□□□□ 0.54
RDH11Q8TC12 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RDH11Q8TC12 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RDH11Q8TC12 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RDH11Q8TC12 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RDH11Q8TC12 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RDH11Q8TC12 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RDH11Q8TC12 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RDH11Q8TC12 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RDH11Q8TC12 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.39■□□□□ 0.53
RDH11Q8TC12 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.39■□□□□ 0.53
RDH11Q8TC12 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RDH11Q8TC12 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RDH11Q8TC12 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RDH11Q8TC12 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RDH11Q8TC12 AC239809.2-201ENST00000415381 517 ntBASIC18.39■□□□□ 0.53
RDH11Q8TC12 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.39■□□□□ 0.53
RDH11Q8TC12 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RDH11Q8TC12 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.39■□□□□ 0.53
RDH11Q8TC12 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.39■□□□□ 0.53
RDH11Q8TC12 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RDH11Q8TC12 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.39■□□□□ 0.53
RDH11Q8TC12 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.39■□□□□ 0.53
RDH11Q8TC12 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RDH11Q8TC12 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
RDH11Q8TC12 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RDH11Q8TC12 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.39■□□□□ 0.53
RDH11Q8TC12 BCL2-203ENST00000589955 5011 ntBASIC18.39■□□□□ 0.53
RDH11Q8TC12 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.39■□□□□ 0.53
RDH11Q8TC12 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
RDH11Q8TC12 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RDH11Q8TC12 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RDH11Q8TC12 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RDH11Q8TC12 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RDH11Q8TC12 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RDH11Q8TC12 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RDH11Q8TC12 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RDH11Q8TC12 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RDH11Q8TC12 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.38■□□□□ 0.53
RDH11Q8TC12 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.38■□□□□ 0.53
RDH11Q8TC12 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RDH11Q8TC12 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RDH11Q8TC12 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RDH11Q8TC12 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RDH11Q8TC12 AC020916.1-201ENST00000587762 1774 ntBASIC18.38■□□□□ 0.53
RDH11Q8TC12 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RDH11Q8TC12 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.38■□□□□ 0.53
RDH11Q8TC12 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RDH11Q8TC12 AC093677.2-201ENST00000600169 1863 ntBASIC18.38■□□□□ 0.53
RDH11Q8TC12 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RDH11Q8TC12 KRASP1-201ENST00000407852 552 ntBASIC18.38■□□□□ 0.53
RDH11Q8TC12 AC004980.1-204ENST00000429707 299 ntBASIC18.38■□□□□ 0.53
RDH11Q8TC12 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.38■□□□□ 0.53
RDH11Q8TC12 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RDH11Q8TC12 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.38■□□□□ 0.53
RDH11Q8TC12 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RDH11Q8TC12 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
RDH11Q8TC12 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RDH11Q8TC12 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.38■□□□□ 0.53
RDH11Q8TC12 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.38■□□□□ 0.53
RDH11Q8TC12 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RDH11Q8TC12 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RDH11Q8TC12 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RDH11Q8TC12 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
RDH11Q8TC12 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.38■□□□□ 0.53
RDH11Q8TC12 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RDH11Q8TC12 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RDH11Q8TC12 AC090340.1-201ENST00000620778 4980 ntBASIC18.38■□□□□ 0.53
RDH11Q8TC12 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RDH11Q8TC12 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.38■□□□□ 0.53
RDH11Q8TC12 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RDH11Q8TC12 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RDH11Q8TC12 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.38■□□□□ 0.53
RDH11Q8TC12 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RDH11Q8TC12 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
RDH11Q8TC12 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms