Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
FNDC9Q8TBE3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FNDC9Q8TBE3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FNDC9Q8TBE3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 MCCD1P1-208ENST00000445732 328 ntBASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 AL445228.2-201ENST00000605589 952 ntBASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 AL023973.1-201ENST00000624619 620 ntBASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 AC036111.1-201ENST00000533973 1582 ntBASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FNDC9Q8TBE3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 RNF152P1-201ENST00000397754 604 ntBASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 KRT18P35-201ENST00000510488 1269 ntBASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 WWOX-216ENST00000569818 525 ntBASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 AC140113.3-201ENST00000605663 199 ntBASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 AL512353.2-201ENST00000448759 1962 ntBASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
FNDC9Q8TBE3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 AC011558.1-201ENST00000623459 338 ntBASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC9Q8TBE3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms